RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
HPS4-218ENST00000519774 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
HPS4-218ENST00000519774 LY75O60449 1722 aa15.7■□□□□ 0.1
HPS4-218ENST00000519774 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
HPS4-218ENST00000519774 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
HPS4-218ENST00000519774 PALLDQ8WX93 1383 aa15.69■□□□□ 0.1
HPS4-218ENST00000519774 MRC1P22897 1456 aa15.69■□□□□ 0.1
HPS4-218ENST00000519774 PROM2Q8N271 834 aa15.68■□□□□ 0.1
HPS4-218ENST00000519774 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
HPS4-218ENST00000519774 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
HPS4-218ENST00000519774 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
HPS4-218ENST00000519774 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
HPS4-218ENST00000519774 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
HPS4-218ENST00000519774 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
HPS4-218ENST00000519774 KCNQ4P56696 695 aa15.66■□□□□ 0.1
HPS4-218ENST00000519774 TEFQ10587 303 aa15.66■□□□□ 0.1
HPS4-218ENST00000519774 MCM10Q7L590 875 aa15.66■□□□□ 0.1
HPS4-218ENST00000519774 RTF1Q92541 710 aaKnown RBP15.66■□□□□ 0.1
HPS4-218ENST00000519774 RUNDC1Q96C34 613 aa15.66■□□□□ 0.1
HPS4-218ENST00000519774 CCNL1Q9UK58 526 aaPredicted RBP15.66■□□□□ 0.1
HPS4-218ENST00000519774 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
HPS4-218ENST00000519774 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
HPS4-218ENST00000519774 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
HPS4-218ENST00000519774 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
HPS4-218ENST00000519774 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
HPS4-218ENST00000519774 SIPA1L3O60292 1781 aaPredicted RBP15.64■□□□□ 0.1
HPS4-218ENST00000519774 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
HPS4-218ENST00000519774 NBPF14Q5TI25 921 aa15.64■□□□□ 0.09
HPS4-218ENST00000519774 LRRC4BQ9NT99 713 aa15.64■□□□□ 0.09
HPS4-218ENST00000519774 C5P01031 1676 aa15.63■□□□□ 0.09
HPS4-218ENST00000519774 CEMIPQ8WUJ3 1361 aa15.63■□□□□ 0.09
HPS4-218ENST00000519774 PSDA5PKW4 1024 aaPredicted RBP15.63■□□□□ 0.09
HPS4-218ENST00000519774 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
HPS4-218ENST00000519774 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
HPS4-218ENST00000519774 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
HPS4-218ENST00000519774 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
HPS4-218ENST00000519774 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
HPS4-218ENST00000519774 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
HPS4-218ENST00000519774 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
HPS4-218ENST00000519774 RIPK4P57078 832 aa15.62■□□□□ 0.09
HPS4-218ENST00000519774 R3HDM1Q15032 1099 aaKnown RBP15.62■□□□□ 0.09
HPS4-218ENST00000519774 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
HPS4-218ENST00000519774 PTCD1O75127 700 aaKnown RBP15.61■□□□□ 0.09
HPS4-218ENST00000519774 SIK1P57059 783 aa15.61■□□□□ 0.09
HPS4-218ENST00000519774 SLC39A6Q13433 755 aa15.61■□□□□ 0.09
HPS4-218ENST00000519774 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
HPS4-218ENST00000519774 THUMPD2Q9BTF0 503 aaKnown RBP15.61■□□□□ 0.09
HPS4-218ENST00000519774 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
HPS4-218ENST00000519774 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
HPS4-218ENST00000519774 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
HPS4-218ENST00000519774 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
HPS4-218ENST00000519774 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
HPS4-218ENST00000519774 TTC5Q8N0Z6 440 aa15.59■□□□□ 0.09
HPS4-218ENST00000519774 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
HPS4-218ENST00000519774 KCPQ6ZWJ8 1503 aa15.58■□□□□ 0.09
HPS4-218ENST00000519774 C4BP0C0L5 1744 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 APAF1O14727 1248 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 ITPK1Q13572 414 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 ZNF827Q17R98 1081 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 TUBGCP6Q96RT7 1819 aa15.58■□□□□ 0.08
HPS4-218ENST00000519774 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
HPS4-218ENST00000519774 TJP1Q07157 1748 aa15.57■□□□□ 0.08
HPS4-218ENST00000519774 BTBD11A6QL63 1104 aa15.57■□□□□ 0.08
HPS4-218ENST00000519774 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
HPS4-218ENST00000519774 SLC15A2Q16348 729 aa15.57■□□□□ 0.08
HPS4-218ENST00000519774 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
HPS4-218ENST00000519774 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
HPS4-218ENST00000519774 ZNF790Q6PG37 636 aa15.56■□□□□ 0.08
HPS4-218ENST00000519774 MIER1Q8N108 512 aa15.56■□□□□ 0.08
HPS4-218ENST00000519774 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
HPS4-218ENST00000519774 COL5A3P25940 1745 aaPredicted RBP15.56■□□□□ 0.08
HPS4-218ENST00000519774 CICQ96RK0 1608 aaPredicted RBP15.55■□□□□ 0.08
HPS4-218ENST00000519774 KCNQ3O43525 872 aa15.55■□□□□ 0.08
HPS4-218ENST00000519774 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
HPS4-218ENST00000519774 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
HPS4-218ENST00000519774 MIS18AQ9NYP9 233 aa15.55■□□□□ 0.08
HPS4-218ENST00000519774 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
HPS4-218ENST00000519774 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
HPS4-218ENST00000519774 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
HPS4-218ENST00000519774 AK7Q96M32 723 aa15.54■□□□□ 0.08
HPS4-218ENST00000519774 TFCP2L1Q9NZI6 479 aa15.54■□□□□ 0.08
HPS4-218ENST00000519774 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
HPS4-218ENST00000519774 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
HPS4-218ENST00000519774 CASZ1Q86V15 1759 aa15.53■□□□□ 0.08
HPS4-218ENST00000519774 UBR3Q6ZT12 1888 aa15.52■□□□□ 0.08
HPS4-218ENST00000519774 HEG1Q9ULI3 1381 aa15.52■□□□□ 0.08
HPS4-218ENST00000519774 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
HPS4-218ENST00000519774 FMNL2Q96PY5 1086 aa15.52■□□□□ 0.08
HPS4-218ENST00000519774 PNPLA7Q6ZV29 1317 aa15.51■□□□□ 0.07
HPS4-218ENST00000519774 GNPATO15228 680 aa15.51■□□□□ 0.07
HPS4-218ENST00000519774 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
HPS4-218ENST00000519774 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
HPS4-218ENST00000519774 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
HPS4-218ENST00000519774 PHF14O94880 888 aa15.5■□□□□ 0.07
HPS4-218ENST00000519774 TSPYL4Q9UJ04 414 aa15.5■□□□□ 0.07
HPS4-218ENST00000519774 SALL2Q9Y467 1007 aaPredicted RBP15.5■□□□□ 0.07
HPS4-218ENST00000519774 CNTNAP4Q9C0A0 1308 aa15.49■□□□□ 0.07
HPS4-218ENST00000519774 CRKLP46109 303 aaKnown RBP15.49■□□□□ 0.07
HPS4-218ENST00000519774 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms