RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ANKRD45Q5TZF3 282 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
SH2D4A-204ENST00000519207 DCTN1Q14203 1278 aa12.52□□□□□ -0.4
SH2D4A-204ENST00000519207 MAP7D2Q96T17 732 aa12.52□□□□□ -0.4
SH2D4A-204ENST00000519207 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
SH2D4A-204ENST00000519207 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
SH2D4A-204ENST00000519207 USP21Q9UK80 565 aa12.51□□□□□ -0.41
SH2D4A-204ENST00000519207 PTPRCP08575 1304 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 RGS12O14924 1447 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 CRB1P82279 1406 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 FLT4P35916 1363 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 ZBTB22O15209 634 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 TRAK2O60296 914 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 OFD1O75665 1012 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 SNX21Q969T3 373 aa12.5□□□□□ -0.41
SH2D4A-204ENST00000519207 PXDNQ92626 1479 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 KDRP35968 1356 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
SH2D4A-204ENST00000519207 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 MCM10Q7L590 875 aa12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 PPP1R9BQ96SB3 815 aa12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
SH2D4A-204ENST00000519207 DDIT3P35638 169 aa12.47□□□□□ -0.41
SH2D4A-204ENST00000519207 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
SH2D4A-204ENST00000519207 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
SH2D4A-204ENST00000519207 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
SH2D4A-204ENST00000519207 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
SH2D4A-204ENST00000519207 CDC45O75419 566 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 SPATA31A3Q5VYP0 1347 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 EP400Q96L91 3159 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
SH2D4A-204ENST00000519207 ATRNO75882 1429 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 AMPHP49418 695 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 RTL1A6NKG5 1358 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
SH2D4A-204ENST00000519207 EYA1Q99502 592 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 KIF2CQ99661 725 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 ZSCAN30Q86W11 494 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
SH2D4A-204ENST00000519207 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 SOX12O15370 315 aa12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 MTERF4Q7Z6M4 381 aaKnown RBP12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
SH2D4A-204ENST00000519207 GSPT1P15170 499 aaKnown RBP12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 HMMRO75330 724 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 NLRP6P59044 892 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 MARF1Q9Y4F3 1742 aaKnown RBP12.41□□□□□ -0.42
SH2D4A-204ENST00000519207 PSME1Q06323 249 aa12.4□□□□□ -0.42
SH2D4A-204ENST00000519207 UNC5CLQ8IV45 518 aa12.4□□□□□ -0.42
SH2D4A-204ENST00000519207 MEIS3Q99687 375 aa12.4□□□□□ -0.42
SH2D4A-204ENST00000519207 KIF1AQ12756 1690 aa12.4□□□□□ -0.42
SH2D4A-204ENST00000519207 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
SH2D4A-204ENST00000519207 HOXC9P31274 260 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms