RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ERBINQ96RT1 1412 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 NUP155O75694 1391 aa4.01□□□□□ -1.77
SKP1-204ENST00000517691 CERKQ8TCT0 537 aa4□□□□□ -1.77
SKP1-204ENST00000517691 TRAIPQ9BWF2 469 aa4□□□□□ -1.77
SKP1-204ENST00000517691 BCORL1Q5H9F3 1711 aa4□□□□□ -1.77
SKP1-204ENST00000517691 SIGLEC1Q9BZZ2 1709 aa4□□□□□ -1.77
SKP1-204ENST00000517691 ADGBQ8N7X0 1667 aa4□□□□□ -1.77
SKP1-204ENST00000517691 MADDQ8WXG6 1647 aa4□□□□□ -1.77
SKP1-204ENST00000517691 BAG6P46379 1132 aa4□□□□□ -1.77
SKP1-204ENST00000517691 NUDT18Q6ZVK8 323 aa4□□□□□ -1.77
SKP1-204ENST00000517691 FNBP4Q8N3X1 1017 aaPredicted RBP4□□□□□ -1.77
SKP1-204ENST00000517691 POM121Q96HA1 1249 aa4□□□□□ -1.77
SKP1-204ENST00000517691 PLXNC1O60486 1568 aa4□□□□□ -1.77
SKP1-204ENST00000517691 ADAMTSL3P82987 1691 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 HSPA2P54652 639 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 MFAP1P55081 439 aaKnown RBP3.99□□□□□ -1.77
SKP1-204ENST00000517691 PRSS12P56730 875 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 TMCO4Q5TGY1 634 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 GZF1Q9H116 711 aaPredicted RBP3.99□□□□□ -1.77
SKP1-204ENST00000517691 RBM27Q9P2N5 1060 aaKnown RBP3.99□□□□□ -1.77
SKP1-204ENST00000517691 RIMS1Q86UR5 1692 aaKnown RBP3.99□□□□□ -1.77
SKP1-204ENST00000517691 PLA2G2CQ5R387 149 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 DCAF5Q96JK2 942 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 TBC1D2Q9BYX2 928 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 PCDHB3Q9Y5E6 796 aa3.99□□□□□ -1.77
SKP1-204ENST00000517691 HFM1A2PYH4 1435 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 NAIPQ13075 1403 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 CROCC2H7BZ55 1655 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 KDM5DQ9BY66 1539 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 ARHGEF15O94989 841 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 ZNF385CQ66K41 422 aaPredicted RBP3.98□□□□□ -1.77
SKP1-204ENST00000517691 TATDN2Q93075 761 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 EYA1Q99502 592 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 PNMA3Q9UL41 463 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 SETD5Q9C0A6 1442 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 TNRQ92752 1358 aa3.98□□□□□ -1.77
SKP1-204ENST00000517691 ITGB2P05107 769 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 SNRKQ9NRH2 765 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 LIMD1Q9UGP4 676 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 UHRF1BP1Q6BDS2 1440 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 FER1L4A9Z1Z3 1794 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 ABCC3O15438 1527 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 CLTCQ00610 1675 aaKnown RBP3.97□□□□□ -1.77
SKP1-204ENST00000517691 EIF2AK4Q9P2K8 1649 aaKnown RBP3.97□□□□□ -1.77
SKP1-204ENST00000517691 PHF20L1A8MW92 1017 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 RFC5P40937 340 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 CLK2P49760 499 aaKnown RBP3.97□□□□□ -1.77
SKP1-204ENST00000517691 IDI1Q13907 227 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 THEMISQ8N1K5 641 aaPredicted RBP3.97□□□□□ -1.77
SKP1-204ENST00000517691 SVOPQ8N4V2 548 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 MPHOSPH9Q99550 1183 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 NPATQ14207 1427 aa3.97□□□□□ -1.77
SKP1-204ENST00000517691 RAB3GAP2Q9H2M9 1393 aa3.96□□□□□ -1.77
SKP1-204ENST00000517691 ACIN1Q9UKV3 1341 aaKnown RBP3.96□□□□□ -1.78
SKP1-204ENST00000517691 PZPP20742 1482 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 RCCD1A6NED2 376 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 ADH1BP00325 375 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 PPP2R2DQ66LE6 453 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 PROSER2Q86WR7 435 aaPredicted RBP3.96□□□□□ -1.78
SKP1-204ENST00000517691 SLF2Q8IX21 1173 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 DHX37Q8IY37 1157 aaKnown RBP3.96□□□□□ -1.78
SKP1-204ENST00000517691 RBM46Q8TBY0 533 aaKnown RBP3.96□□□□□ -1.78
SKP1-204ENST00000517691 SPIRE2Q8WWL2 714 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 PCGF6Q9BYE7 350 aa3.96□□□□□ -1.78
SKP1-204ENST00000517691 RNF17Q9BXT8 1623 aaKnown RBP3.96□□□□□ -1.78
SKP1-204ENST00000517691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.95□□□□□ -1.78
SKP1-204ENST00000517691 SPDYE5A6NIY4 337 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 CD46P15529 392 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 TXKP42681 527 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 SLC4A3P48751 1232 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 RIC3Q7Z5B4 369 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 BANK1Q8NDB2 785 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 SLC52A1Q9NWF4 448 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 USP35Q9P2H5 1018 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 COG6Q9Y2V7 657 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 PRDM15P57071 1507 aaPredicted RBP3.95□□□□□ -1.78
SKP1-204ENST00000517691 MROH1Q8NDA8 1641 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 ARHGAP31Q2M1Z3 1444 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 FAM135AQ9P2D6 1515 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 E9PSI1 815 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 WNT7AO00755 349 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 SPTLC1O15269 473 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 RNF40O75150 1001 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 ZNF326Q5BKZ1 582 aaKnown RBP3.95□□□□□ -1.78
SKP1-204ENST00000517691 ANKLE2Q86XL3 938 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 SLC6A16Q9GZN6 736 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 EID1Q9Y6B2 187 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 ERVK-7P63135 1459 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 LMTK3Q96Q04 1460 aa3.95□□□□□ -1.78
SKP1-204ENST00000517691 C3P01024 1663 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 LMTK2Q8IWU2 1503 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 PPP1R15AO75807 674 aaPredicted RBP3.94□□□□□ -1.78
SKP1-204ENST00000517691 FZD5Q13467 585 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 IRF5Q13568 498 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 DIXDC1Q155Q3 683 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 TUSC1Q2TAM9 212 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 SWT1Q5T5J6 900 aaKnown RBP3.94□□□□□ -1.78
SKP1-204ENST00000517691 NUTM2DQ5VT03 806 aaPredicted RBP3.94□□□□□ -1.78
SKP1-204ENST00000517691 TXNDC2Q86VQ3 553 aa3.94□□□□□ -1.78
SKP1-204ENST00000517691 VWDEQ8N2E2 1590 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms