RNA–Protein interactions for RNA: ENST00000511307.5

SH3TC2-209, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 3,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-209ENST00000511307 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.38
SH3TC2-209ENST00000511307 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 HMMRO75330 724 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 SDSP20132 328 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 NEK4P51957 841 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
SH3TC2-209ENST00000511307 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
SH3TC2-209ENST00000511307 DCCP43146 1447 aa12.69□□□□□ -0.38
SH3TC2-209ENST00000511307 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
SH3TC2-209ENST00000511307 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
SH3TC2-209ENST00000511307 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
SH3TC2-209ENST00000511307 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
SH3TC2-209ENST00000511307 EYA1Q99502 592 aa12.68□□□□□ -0.38
SH3TC2-209ENST00000511307 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
SH3TC2-209ENST00000511307 MSH6P52701 1360 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 CAVIN1Q6NZI2 390 aaKnown RBP12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 HOXC9P31274 260 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 PKP1Q13835 747 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 MPNDQ8N594 471 aa12.67□□□□□ -0.38
SH3TC2-209ENST00000511307 ST18O60284 1047 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 ZGPATQ8N5A5 531 aaKnown RBP12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
SH3TC2-209ENST00000511307 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
SH3TC2-209ENST00000511307 GNAI2P04899 355 aa12.65□□□□□ -0.38
SH3TC2-209ENST00000511307 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
SH3TC2-209ENST00000511307 KDRP35968 1356 aa12.65□□□□□ -0.39
SH3TC2-209ENST00000511307 HSPA2P54652 639 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 FLIIQ13045 1269 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 CHL1O00533 1208 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 IP6K1Q92551 441 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 ABCC4O15439 1325 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 TEFQ10587 303 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 RPAP2Q8IXW5 612 aaPredicted RBP12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 RGPD1P0DJD0 1748 aa12.64□□□□□ -0.39
SH3TC2-209ENST00000511307 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 REC8O95072 547 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 GLIPR1L2Q4G1C9 344 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 KCNJ4P48050 445 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 ARID3AQ99856 593 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
SH3TC2-209ENST00000511307 FGD1P98174 961 aa12.62□□□□□ -0.39
SH3TC2-209ENST00000511307 LRRCC1Q9C099 1032 aa12.62□□□□□ -0.39
SH3TC2-209ENST00000511307 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
SH3TC2-209ENST00000511307 SRGAP3O43295 1099 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 ERC2O15083 957 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 RABEP1Q15276 862 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 MST1RQ04912 1400 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 MRE11P49959 708 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 GAS2L3Q86XJ1 694 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 KIF2CQ99661 725 aa12.61□□□□□ -0.39
SH3TC2-209ENST00000511307 GCP02774 474 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 PDE1AP54750 535 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 CHMP3Q9Y3E7 222 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 NFAT5O94916 1531 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 MCCP23508 829 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 PIP4K2AP48426 406 aaPredicted RBP12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 SIL1Q9H173 461 aa12.6□□□□□ -0.39
SH3TC2-209ENST00000511307 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms