RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
PRDM16-206ENST00000511072 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
PRDM16-206ENST00000511072 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
PRDM16-206ENST00000511072 TTLL5Q6EMB2 1281 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 SYCE3A1L190 88 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 SMC2O95347 1197 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 ABCF2Q9UG63 623 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
PRDM16-206ENST00000511072 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
PRDM16-206ENST00000511072 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
PRDM16-206ENST00000511072 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
PRDM16-206ENST00000511072 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
PRDM16-206ENST00000511072 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
PRDM16-206ENST00000511072 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
PRDM16-206ENST00000511072 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 CCDC39Q9UFE4 941 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
PRDM16-206ENST00000511072 PIBF1Q8WXW3 757 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 DMTNQ08495 405 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
PRDM16-206ENST00000511072 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
PRDM16-206ENST00000511072 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 XBP1P17861 261 aa16.84■□□□□ 0.29
PRDM16-206ENST00000511072 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
PRDM16-206ENST00000511072 A0A087WZG4 1122 aa16.83■□□□□ 0.29
PRDM16-206ENST00000511072 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.29
PRDM16-206ENST00000511072 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.28
PRDM16-206ENST00000511072 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRDM16-206ENST00000511072 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
PRDM16-206ENST00000511072 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
PRDM16-206ENST00000511072 FAM135AQ9P2D6 1515 aa16.83■□□□□ 0.28
PRDM16-206ENST00000511072 POGZQ7Z3K3 1410 aa16.83■□□□□ 0.28
PRDM16-206ENST00000511072 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 ATP2B2Q01814 1243 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 ANKRD1Q15327 319 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
PRDM16-206ENST00000511072 PLCH2O75038 1416 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 SPATA32Q96LK8 384 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 GPTP24298 496 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
PRDM16-206ENST00000511072 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 CAMK4Q16566 473 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 TCEAL9Q9UHQ7 104 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 USP19O94966 1318 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 GUCY1B3Q02153 619 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 FILIP1Q7Z7B0 1213 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
PRDM16-206ENST00000511072 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
PRDM16-206ENST00000511072 TDO2P48775 406 aa16.8■□□□□ 0.28
PRDM16-206ENST00000511072 LRP2BPQ9P2M1 347 aa16.8■□□□□ 0.28
PRDM16-206ENST00000511072 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
PRDM16-206ENST00000511072 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
PRDM16-206ENST00000511072 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
PRDM16-206ENST00000511072 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
PRDM16-206ENST00000511072 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
PRDM16-206ENST00000511072 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 CTDP1Q9Y5B0 961 aaPredicted RBP16.79■□□□□ 0.28
PRDM16-206ENST00000511072 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 NACAP1Q9BZK3 213 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
PRDM16-206ENST00000511072 ERICH4A6NGS2 130 aa16.78■□□□□ 0.28
PRDM16-206ENST00000511072 ZBTB22O15209 634 aa16.78■□□□□ 0.28
PRDM16-206ENST00000511072 GTPBP4Q9BZE4 634 aaKnown RBP16.78■□□□□ 0.28
PRDM16-206ENST00000511072 NAP1L1P55209 391 aaKnown RBP16.78■□□□□ 0.28
PRDM16-206ENST00000511072 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
PRDM16-206ENST00000511072 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
PRDM16-206ENST00000511072 STARD3NLO95772 234 aa16.78■□□□□ 0.28
PRDM16-206ENST00000511072 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
PRDM16-206ENST00000511072 KIF20AO95235 890 aa16.77■□□□□ 0.28
PRDM16-206ENST00000511072 GNL3LQ9NVN8 582 aaKnown RBP16.77■□□□□ 0.28
PRDM16-206ENST00000511072 SDSP20132 328 aa16.77■□□□□ 0.28
PRDM16-206ENST00000511072 TFIP11Q9UBB9 837 aaKnown RBP16.77■□□□□ 0.28
PRDM16-206ENST00000511072 ZKSCAN5Q9Y2L8 839 aa16.77■□□□□ 0.28
PRDM16-206ENST00000511072 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
PRDM16-206ENST00000511072 HMGN5P82970 282 aaKnown RBP16.77■□□□□ 0.27
PRDM16-206ENST00000511072 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.27
PRDM16-206ENST00000511072 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
PRDM16-206ENST00000511072 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 FAM177A1Q8N128 213 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms