RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
PRPF3-207ENST00000496202 RIPK4P57078 832 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 PIGBQ92521 554 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
PRPF3-207ENST00000496202 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
PRPF3-207ENST00000496202 MRC1P22897 1456 aa12.72□□□□□ -0.37
PRPF3-207ENST00000496202 APAF1O14727 1248 aa12.71□□□□□ -0.37
PRPF3-207ENST00000496202 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
PRPF3-207ENST00000496202 MCM10Q7L590 875 aa12.71□□□□□ -0.37
PRPF3-207ENST00000496202 SLC52A2Q9HAB3 445 aa12.71□□□□□ -0.37
PRPF3-207ENST00000496202 PLSCR1O15162 318 aa12.7□□□□□ -0.38
PRPF3-207ENST00000496202 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
PRPF3-207ENST00000496202 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
PRPF3-207ENST00000496202 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
PRPF3-207ENST00000496202 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
PRPF3-207ENST00000496202 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
PRPF3-207ENST00000496202 DCTN1Q14203 1278 aa12.69□□□□□ -0.38
PRPF3-207ENST00000496202 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-207ENST00000496202 EZH2Q15910 746 aaKnown RBP12.68□□□□□ -0.38
PRPF3-207ENST00000496202 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
PRPF3-207ENST00000496202 ASAP1Q9ULH1 1129 aa12.68□□□□□ -0.38
PRPF3-207ENST00000496202 LY75O60449 1722 aa12.68□□□□□ -0.38
PRPF3-207ENST00000496202 RREB1Q92766 1687 aa12.67□□□□□ -0.38
PRPF3-207ENST00000496202 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
PRPF3-207ENST00000496202 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
PRPF3-207ENST00000496202 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 NUP188Q5SRE5 1749 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
PRPF3-207ENST00000496202 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
PRPF3-207ENST00000496202 SLC27A3Q5K4L6 730 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
PRPF3-207ENST00000496202 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
PRPF3-207ENST00000496202 ATG3Q9NT62 314 aa12.66□□□□□ -0.38
PRPF3-207ENST00000496202 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
PRPF3-207ENST00000496202 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
PRPF3-207ENST00000496202 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
PRPF3-207ENST00000496202 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
PRPF3-207ENST00000496202 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
PRPF3-207ENST00000496202 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
PRPF3-207ENST00000496202 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 SIK1P57059 783 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
PRPF3-207ENST00000496202 C5P01031 1676 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
PRPF3-207ENST00000496202 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
PRPF3-207ENST00000496202 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
PRPF3-207ENST00000496202 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
PRPF3-207ENST00000496202 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 KCNQ4P56696 695 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
PRPF3-207ENST00000496202 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 PROM2Q8N271 834 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
PRPF3-207ENST00000496202 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
PRPF3-207ENST00000496202 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
PRPF3-207ENST00000496202 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
PRPF3-207ENST00000496202 TJP1Q07157 1748 aa12.59□□□□□ -0.39
PRPF3-207ENST00000496202 GNAI1P63096 354 aa12.59□□□□□ -0.39
PRPF3-207ENST00000496202 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
PRPF3-207ENST00000496202 AK7Q96M32 723 aa12.59□□□□□ -0.39
PRPF3-207ENST00000496202 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
PRPF3-207ENST00000496202 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
PRPF3-207ENST00000496202 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 KCNQ3O43525 872 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
PRPF3-207ENST00000496202 ITPK1Q13572 414 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
PRPF3-207ENST00000496202 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 IL16Q14005 1332 aa12.58□□□□□ -0.4
PRPF3-207ENST00000496202 CHL1O00533 1208 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
PRPF3-207ENST00000496202 WDR63Q8IWG1 891 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
PRPF3-207ENST00000496202 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
PRPF3-207ENST00000496202 STARD3NLO95772 234 aa12.56□□□□□ -0.4
PRPF3-207ENST00000496202 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF3-207ENST00000496202 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
PRPF3-207ENST00000496202 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
PRPF3-207ENST00000496202 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
PRPF3-207ENST00000496202 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms