RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 SMARCC1Q92922 1105 aaPredicted RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 SIL1Q9H173 461 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 CHPF2Q9P2E5 772 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 MST1RQ04912 1400 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 KIF16BQ96L93 1317 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 KCNQ2O43526 872 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 HMMRO75330 724 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 COPS6Q7L5N1 327 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 IL17REQ8NFR9 667 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 ZNF496Q96IT1 587 aaPredicted RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 NOP58Q9Y2X3 529 aaKnown RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 RBM19Q9Y4C8 960 aaKnown RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 MAP3K5Q99683 1374 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 LRRC7Q96NW7 1537 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 NBPF14Q5TI25 921 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 ZNF790Q6PG37 636 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 ILDR1Q86SU0 546 aaPredicted RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 NEUROD6Q96NK8 337 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 SRCIN1Q9C0H9 1055 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 PPP4R2Q9NY27 417 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 HDAC5Q9UQL6 1122 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 DIP2AQ14689 1571 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 PI4KAP2A4QPH2 592 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 ANKRD45Q5TZF3 282 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 PI4KAP1Q8N8J0 262 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 XAGE3Q8WTP9 111 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 RWDD1Q9H446 243 aaPredicted RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 SPINK5Q9NQ38 1064 aaPredicted RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 TRMT112Q9UI30 125 aaKnown RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 RTCBQ9Y3I0 505 aaKnown RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 ADAMTSL3P82987 1691 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 SPATA31A6Q5VVP1 1343 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 VPS37DQ86XT2 251 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 DBF4Q9UBU7 674 aaPredicted RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 NKTRP30414 1462 aaKnown RBP5.57□□□□□ -1.52
TRA2B-215ENST00000492417 UBR1Q8IWV7 1749 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 TRIM6-TRIM34B2RNG4 842 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 FAM196AQ6ZSG2 479 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 SLC52A2Q9HAB3 445 aa5.57□□□□□ -1.52
TRA2B-215ENST00000492417 DCAF8L1A6NGE4 600 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 CYP27B1O15528 508 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 G3BP1Q13283 466 aaKnown RBP eCLIP5.56□□□□□ -1.522e-7■□□□□ 10.7
TRA2B-215ENST00000492417 DDRGK1Q96HY6 314 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 ADGRB1O14514 1584 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 FLIIQ13045 1269 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 ZNF622Q969S3 477 aaKnown RBP eCLIP5.56□□□□□ -1.52
TRA2B-215ENST00000492417 STK32BQ9NY57 414 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 DDX19BQ9UMR2 479 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 MAP3K2Q9Y2U5 619 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 USP16Q9Y5T5 823 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 SURF6O75683 361 aaKnown RBP5.56□□□□□ -1.52
TRA2B-215ENST00000492417 SMIM5Q71RC9 77 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 DZIP3Q86Y13 1208 aaKnown RBP5.56□□□□□ -1.52
TRA2B-215ENST00000492417 TEX13AQ9BXU3 409 aaPredicted RBP5.56□□□□□ -1.52
TRA2B-215ENST00000492417 PHAXQ9H814 394 aaKnown RBP5.56□□□□□ -1.52
TRA2B-215ENST00000492417 CNNM1Q9NRU3 951 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 IQGAP1P46940 1657 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 QRICH2Q9H0J4 1663 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 TECPR2O15040 1411 aa5.56□□□□□ -1.52
TRA2B-215ENST00000492417 A0A087WZG4 1122 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 EN1Q05925 392 aaPredicted RBP5.55□□□□□ -1.52
TRA2B-215ENST00000492417 ATF7IPQ6VMQ6 1270 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 ANKRD13DQ6ZTN6 518 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 ISY1Q9ULR0 285 aaKnown RBP5.55□□□□□ -1.52
TRA2B-215ENST00000492417 NIP7Q9Y221 180 aaKnown RBP eCLIP5.55□□□□□ -1.52
TRA2B-215ENST00000492417 CPS1P31327 1500 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 NPC1L1Q9UHC9 1359 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 PRAMEF22A3QJZ6 481 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 TRAPPC3LQ5T215 181 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
TRA2B-215ENST00000492417 TRIM35Q9UPQ4 493 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 IGSF1Q8N6C5 1336 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 NRXN1Q9ULB1 1477 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 PPLO60437 1756 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 UBE3BQ7Z3V4 1068 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 TMEM57Q8N5G2 664 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 DNAAF4Q8WXU2 420 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 MPHOSPH8Q99549 860 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 SETBP1Q9Y6X0 1596 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 PNPLA6Q8IY17 1366 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 LOC102724428A0A0B4J2F2 783 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 RARSP54136 660 aaKnown RBP5.55□□□□□ -1.52
TRA2B-215ENST00000492417 SIK1P57059 783 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 DEFB132Q7Z7B7 95 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 PIGBQ92521 554 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 TSHZ2Q9NRE2 1034 aa5.55□□□□□ -1.52
TRA2B-215ENST00000492417 CPSF1Q10570 1443 aaKnown RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 AATKQ6ZMQ8 1374 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 C20orf194Q5TEA3 1177 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 SETDB2Q96T68 719 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 HYPKQ9NX55 129 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 NAP1L2Q9ULW6 460 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 PSDA5PKW4 1024 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-215ENST00000492417 GNAI3P08754 354 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 VPS72Q15906 364 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 CCDC57Q2TAC2 916 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 G2E3Q7L622 706 aa5.54□□□□□ -1.52
TRA2B-215ENST00000492417 RILPL2Q969X0 211 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms