RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 PTGDRQ13258 359 aa9.43□□□□□ -0.9
TMC1-204ENST00000486417 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
TMC1-204ENST00000486417 FAM117AQ9C073 453 aa9.43□□□□□ -0.9
TMC1-204ENST00000486417 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
TMC1-204ENST00000486417 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
TMC1-204ENST00000486417 PHRF1Q9P1Y6 1649 aaKnown RBP9.43□□□□□ -0.9
TMC1-204ENST00000486417 NFAT5O94916 1531 aa9.42□□□□□ -0.9
TMC1-204ENST00000486417 WDR63Q8IWG1 891 aa9.42□□□□□ -0.9
TMC1-204ENST00000486417 PNNQ9H307 717 aaKnown RBP9.42□□□□□ -0.9
TMC1-204ENST00000486417 FCHSD2O94868 740 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 SLC34A2O95436 690 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 HIC1Q14526 733 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 ALS2Q96Q42 1657 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 DCCP43146 1447 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 PRKAR2BP31323 418 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
TMC1-204ENST00000486417 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
TMC1-204ENST00000486417 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
TMC1-204ENST00000486417 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
TMC1-204ENST00000486417 FLT4P35916 1363 aa9.4□□□□□ -0.9
TMC1-204ENST00000486417 NCOA3Q9Y6Q9 1424 aa9.4□□□□□ -0.9
TMC1-204ENST00000486417 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.9
TMC1-204ENST00000486417 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.91
TMC1-204ENST00000486417 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.91
TMC1-204ENST00000486417 MST1RQ04912 1400 aa9.4□□□□□ -0.91
TMC1-204ENST00000486417 SLIT3O75094 1523 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 HMOX1P09601 288 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 HSPA2P54652 639 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
TMC1-204ENST00000486417 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
TMC1-204ENST00000486417 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 ARHGEF10O15013 1369 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 TMEM94Q12767 1356 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 KIF24Q5T7B8 1368 aa9.39□□□□□ -0.91
TMC1-204ENST00000486417 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 PLIN1O60240 522 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 NEFMP07197 916 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 IL16Q14005 1332 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 AMHR2Q16671 573 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 ESCO1Q5FWF5 840 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
TMC1-204ENST00000486417 RIPK4P57078 832 aa9.37□□□□□ -0.91
TMC1-204ENST00000486417 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
TMC1-204ENST00000486417 NFE2L2Q16236 605 aa9.37□□□□□ -0.91
TMC1-204ENST00000486417 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.37□□□□□ -0.91
TMC1-204ENST00000486417 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMC1-204ENST00000486417 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
TMC1-204ENST00000486417 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
TMC1-204ENST00000486417 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
TMC1-204ENST00000486417 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
TMC1-204ENST00000486417 CRYBG1Q9Y4K1 1723 aa9.37□□□□□ -0.91
TMC1-204ENST00000486417 FANCIQ9NVI1 1328 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 ABTB2Q8N961 1025 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 CAMTA1Q9Y6Y1 1673 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 LRRC37A3O60309 1634 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 RGPD2P0DJD1 1756 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 MAP3K7O43318 606 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 PHF14O94880 888 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 ORAI2Q96SN7 254 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
TMC1-204ENST00000486417 KDRP35968 1356 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 AMPHP49418 695 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 PHOX2BQ99453 314 aa9.35□□□□□ -0.91
TMC1-204ENST00000486417 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
TMC1-204ENST00000486417 MED1Q15648 1581 aaPredicted RBP9.34□□□□□ -0.91
TMC1-204ENST00000486417 BCAR3O75815 825 aa9.34□□□□□ -0.91
TMC1-204ENST00000486417 HOXC9P31274 260 aa9.34□□□□□ -0.91
TMC1-204ENST00000486417 PSME1Q06323 249 aa9.34□□□□□ -0.91
TMC1-204ENST00000486417 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.91
TMC1-204ENST00000486417 TSR2Q969E8 191 aaKnown RBP9.34□□□□□ -0.91
TMC1-204ENST00000486417 MSH6P52701 1360 aa9.33□□□□□ -0.92
TMC1-204ENST00000486417 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
TMC1-204ENST00000486417 RARSP54136 660 aaKnown RBP9.33□□□□□ -0.92
TMC1-204ENST00000486417 LMOD3Q0VAK6 560 aa9.33□□□□□ -0.92
TMC1-204ENST00000486417 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
TMC1-204ENST00000486417 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
TMC1-204ENST00000486417 USP19O94966 1318 aa9.32□□□□□ -0.92
TMC1-204ENST00000486417 PXDNQ92626 1479 aa9.32□□□□□ -0.92
TMC1-204ENST00000486417 MS4A1P11836 297 aa9.32□□□□□ -0.92
TMC1-204ENST00000486417 ATF3P18847 181 aa9.32□□□□□ -0.92
TMC1-204ENST00000486417 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
TMC1-204ENST00000486417 FOXO3O43524 673 aa9.31□□□□□ -0.92
TMC1-204ENST00000486417 XPCQ01831 940 aaPredicted RBP9.31□□□□□ -0.92
TMC1-204ENST00000486417 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
TMC1-204ENST00000486417 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
TMC1-204ENST00000486417 SLAIN1Q8ND83 568 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms