RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ZSCAN20P17040 1043 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-213ENST00000482878 MPNDQ8N594 471 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
CCDC78-213ENST00000482878 VGLL3A8MV65 326 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 IGSF3O75054 1194 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 NRXN3Q9Y4C0 1643 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 SPATA31D1Q6ZQQ2 1576 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 ST18O60284 1047 aa15.11■□□□□ 0.01
CCDC78-213ENST00000482878 F6X3S4 739 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 G2E3Q7L622 706 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 ZDHHC9Q9Y397 364 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 ZNF445P59923 1031 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 ZSCAN23Q3MJ62 389 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 CHAMP1Q96JM3 812 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 RBSNQ9H1K0 784 aa15.1■□□□□ 0.01
CCDC78-213ENST00000482878 FAM177BA6PVY3 158 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 REC8O95072 547 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
CCDC78-213ENST00000482878 TTC21BQ7Z4L5 1316 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 ERC2O15083 957 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 FOXO3O43524 673 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 C3P01024 1663 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 MON2Q7Z3U7 1717 aa15.09■□□□□ 0.01
CCDC78-213ENST00000482878 CRB1P82279 1406 aa15.08■□□□□ 0.01
CCDC78-213ENST00000482878 SPDYE4A6NLX3 237 aa15.08■□□□□ 0.01
CCDC78-213ENST00000482878 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0.01
CCDC78-213ENST00000482878 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0.01
CCDC78-213ENST00000482878 HS1BP3Q53T59 392 aa15.08■□□□□ 0.01
CCDC78-213ENST00000482878 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.08■□□□□ 0.01
CCDC78-213ENST00000482878 PDE1AP54750 535 aa15.08■□□□□ 0
CCDC78-213ENST00000482878 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
CCDC78-213ENST00000482878 CCDC39Q9UFE4 941 aa15.08■□□□□ 0
CCDC78-213ENST00000482878 NRKQ7Z2Y5 1582 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 GPT2Q8TD30 523 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 SIRT1Q96EB6 747 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 RBM27Q9P2N5 1060 aaKnown RBP15.07■□□□□ 0
CCDC78-213ENST00000482878 ACEP12821 1306 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 AK9Q5TCS8 1911 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 HMMRO75330 724 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
CCDC78-213ENST00000482878 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
CCDC78-213ENST00000482878 TECPR2O15040 1411 aa15.06■□□□□ 0
CCDC78-213ENST00000482878 GTPBP4Q9BZE4 634 aaKnown RBP15.06■□□□□ 0
CCDC78-213ENST00000482878 CGNQ9P2M7 1197 aaKnown RBP15.06■□□□□ 0
CCDC78-213ENST00000482878 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
CCDC78-213ENST00000482878 HDGFP51858 240 aaKnown RBP15.06■□□□□ 0
CCDC78-213ENST00000482878 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
CCDC78-213ENST00000482878 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.06■□□□□ 0
CCDC78-213ENST00000482878 EXOC6BQ9Y2D4 811 aa15.06■□□□□ 0
CCDC78-213ENST00000482878 KIAA2012Q0VF49 1180 aa15.05■□□□□ 0
CCDC78-213ENST00000482878 TSPYL4Q9UJ04 414 aa15.05■□□□□ 0
CCDC78-213ENST00000482878 AGLP35573 1532 aa15.05■□□□□ 0
CCDC78-213ENST00000482878 OVOS2A0A0J9YW53 1432 aa15.05■□□□□ 0
CCDC78-213ENST00000482878 OVOS2Q6IE36 1432 aa15.05■□□□□ 0
CCDC78-213ENST00000482878 KIF20AO95235 890 aa15.05■□□□□ -0
CCDC78-213ENST00000482878 MTHFSDQ2M296 383 aaKnown RBP15.05■□□□□ -0
CCDC78-213ENST00000482878 FOXD4L5Q5VV16 416 aaPredicted RBP15.05■□□□□ -0
CCDC78-213ENST00000482878 FOXD4L4Q8WXT5 416 aaPredicted RBP15.05■□□□□ -0
CCDC78-213ENST00000482878 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
CCDC78-213ENST00000482878 EID1Q9Y6B2 187 aa15.05■□□□□ -0
CCDC78-213ENST00000482878 NEK4P51957 841 aa15.04■□□□□ -0
CCDC78-213ENST00000482878 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
CCDC78-213ENST00000482878 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
CCDC78-213ENST00000482878 AMPHP49418 695 aa15.04■□□□□ -0
CCDC78-213ENST00000482878 TMX3Q96JJ7 454 aa15.04■□□□□ -0
CCDC78-213ENST00000482878 NSFL1CQ9UNZ2 370 aaKnown RBP15.04■□□□□ -0
CCDC78-213ENST00000482878 AKAP12Q02952 1782 aa15.03■□□□□ -0
CCDC78-213ENST00000482878 SALL3Q9BXA9 1300 aa15.03■□□□□ -0
CCDC78-213ENST00000482878 GNAI2P04899 355 aa15.02■□□□□ -0
CCDC78-213ENST00000482878 RTF1Q92541 710 aaKnown RBP15.02■□□□□ -0
CCDC78-213ENST00000482878 TMEM63CQ9P1W3 806 aa15.02■□□□□ -0
CCDC78-213ENST00000482878 PALD1Q9ULE6 856 aa15.02■□□□□ -0
CCDC78-213ENST00000482878 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
CCDC78-213ENST00000482878 MCM5P33992 734 aa15.02□□□□□ -0.01
CCDC78-213ENST00000482878 ESYT1Q9BSJ8 1104 aa15.02□□□□□ -0.01
CCDC78-213ENST00000482878 SYCE3A1L190 88 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 PNMA6EA0A0J9YXQ4 647 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 PLEKHG3A1L390 1219 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 USP6P35125 1406 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 ITSN1Q15811 1721 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 MYRIPQ8NFW9 859 aa15.01□□□□□ -0.01
CCDC78-213ENST00000482878 USP31Q70CQ4 1352 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 ATP2B3Q16720 1220 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 LRRCC1Q9C099 1032 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 PDLIM2Q96JY6 352 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 ZBTB22O15209 634 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 MX1P20591 662 aa15□□□□□ -0.01
CCDC78-213ENST00000482878 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
CCDC78-213ENST00000482878 TPRNQ4KMQ1 711 aa14.99□□□□□ -0.01
CCDC78-213ENST00000482878 ZNF830Q96NB3 372 aaPredicted RBP14.99□□□□□ -0.01
CCDC78-213ENST00000482878 ARHGEF10O15013 1369 aa14.99□□□□□ -0.01
CCDC78-213ENST00000482878 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
CCDC78-213ENST00000482878 KIF3AQ9Y496 699 aa14.99□□□□□ -0.01
CCDC78-213ENST00000482878 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
CCDC78-213ENST00000482878 CHMLP26374 656 aa14.98□□□□□ -0.01
CCDC78-213ENST00000482878 FLIIQ13045 1269 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms