RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.36
SIK3-210ENST00000480468 FBLN2P98095 1184 aa12.77□□□□□ -0.37
SIK3-210ENST00000480468 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
SIK3-210ENST00000480468 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
SIK3-210ENST00000480468 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.37
SIK3-210ENST00000480468 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
SIK3-210ENST00000480468 SLFNL1Q499Z3 407 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 ZBTB22O15209 634 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
SIK3-210ENST00000480468 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
SIK3-210ENST00000480468 VGLL3A8MV65 326 aa12.75□□□□□ -0.37
SIK3-210ENST00000480468 PDE1AP54750 535 aa12.75□□□□□ -0.37
SIK3-210ENST00000480468 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
SIK3-210ENST00000480468 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
SIK3-210ENST00000480468 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.75□□□□□ -0.37
SIK3-210ENST00000480468 RPGRIP1LQ68CZ1 1315 aa12.75□□□□□ -0.37
SIK3-210ENST00000480468 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
SIK3-210ENST00000480468 TNNT1P13805 278 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 PTGS1P23219 599 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 PALD1Q9ULE6 856 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
SIK3-210ENST00000480468 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 FRMPD1Q5SYB0 1578 aa12.74□□□□□ -0.37
SIK3-210ENST00000480468 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
SIK3-210ENST00000480468 FYB1O15117 783 aa12.73□□□□□ -0.37
SIK3-210ENST00000480468 HMMRO75330 724 aa12.73□□□□□ -0.37
SIK3-210ENST00000480468 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
SIK3-210ENST00000480468 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
SIK3-210ENST00000480468 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
SIK3-210ENST00000480468 F13A1P00488 732 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
SIK3-210ENST00000480468 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
SIK3-210ENST00000480468 SALL3Q9BXA9 1300 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 STX6O43752 255 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 RNF20Q5VTR2 975 aa12.72□□□□□ -0.37
SIK3-210ENST00000480468 CCDC171Q6TFL3 1326 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 ZSCAN25Q6NSZ9 544 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 C8orf58Q8NAV2 365 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
SIK3-210ENST00000480468 CHMLP26374 656 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 ERO1AQ96HE7 468 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 PTPRCP08575 1304 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 KIF3BO15066 747 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 CAPN2P17655 700 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 SYT1P21579 422 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 CEP135Q66GS9 1140 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 PLA2G4DQ86XP0 818 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
SIK3-210ENST00000480468 NEMFO60524 1076 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 CDC25BP30305 580 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 CYP2C19P33261 490 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 HSPA4P34932 840 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 MSH6P52701 1360 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 CLTCQ00610 1675 aaKnown RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 FIBPO43427 364 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 ZNF75DP51815 510 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 NAA30Q147X3 362 aaPredicted RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
SIK3-210ENST00000480468 NOL8Q76FK4 1167 aaKnown RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
SIK3-210ENST00000480468 LRMPQ12912 555 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 TPD52L1Q16890 204 aaPredicted RBP12.68□□□□□ -0.38
SIK3-210ENST00000480468 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
SIK3-210ENST00000480468 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 RIMS2Q9UQ26 1411 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 CDK12Q9NYV4 1490 aaPredicted RBP12.68□□□□□ -0.38
SIK3-210ENST00000480468 TYRO3Q06418 890 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 NYAP1Q6ZVC0 841 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 TTC14Q96N46 770 aa12.68□□□□□ -0.38
SIK3-210ENST00000480468 ELP1O95163 1332 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 AOX1Q06278 1338 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 FBXO38Q6PIJ6 1188 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 ABCC3O15438 1527 aa12.67□□□□□ -0.38
SIK3-210ENST00000480468 APBB1O00213 710 aa12.66□□□□□ -0.38
SIK3-210ENST00000480468 CAVIN2O95810 425 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms