RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ANKRD44Q8N8A2 993 aa16.33■□□□□ 0.21
PDZRN3-208ENST00000479530 SDSP20132 328 aa16.33■□□□□ 0.2
PDZRN3-208ENST00000479530 PDLIM2Q96JY6 352 aa16.33■□□□□ 0.2
PDZRN3-208ENST00000479530 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-208ENST00000479530 SSH2Q76I76 1423 aa16.33■□□□□ 0.2
PDZRN3-208ENST00000479530 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
PDZRN3-208ENST00000479530 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 AMPHP49418 695 aa16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 TMEM63CQ9P1W3 806 aa16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
PDZRN3-208ENST00000479530 KIF13AQ9H1H9 1805 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 SYCE3A1L190 88 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 FAM13BQ9NYF5 915 aa16.31■□□□□ 0.2
PDZRN3-208ENST00000479530 NLRP6P59044 892 aa16.3■□□□□ 0.2
PDZRN3-208ENST00000479530 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
PDZRN3-208ENST00000479530 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
PDZRN3-208ENST00000479530 NRKQ7Z2Y5 1582 aa16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 KCNA6P17658 529 aa16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 KIAA0232Q92628 1395 aa16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
PDZRN3-208ENST00000479530 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
PDZRN3-208ENST00000479530 TBX22Q9Y458 520 aa16.27■□□□□ 0.2
PDZRN3-208ENST00000479530 ST18O60284 1047 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 ARID3AQ99856 593 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 ZKSCAN5Q9Y2L8 839 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 UQCRHLA0A096LP55 91 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 UQCRHP07919 91 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 LRSAM1Q6UWE0 723 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
PDZRN3-208ENST00000479530 FLT4P35916 1363 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 PTPRCP08575 1304 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 SBNO1A3KN83 1393 aa16.25■□□□□ 0.19
PDZRN3-208ENST00000479530 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 TERF1P54274 439 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 HOXC9P31274 260 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
PDZRN3-208ENST00000479530 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
PDZRN3-208ENST00000479530 KDRP35968 1356 aa16.23■□□□□ 0.19
PDZRN3-208ENST00000479530 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
PDZRN3-208ENST00000479530 NEK4P51957 841 aa16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 NOL8Q76FK4 1167 aaKnown RBP16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 MPNDQ8N594 471 aa16.22■□□□□ 0.19
PDZRN3-208ENST00000479530 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.19
PDZRN3-208ENST00000479530 FLIIQ13045 1269 aa16.21■□□□□ 0.19
PDZRN3-208ENST00000479530 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
PDZRN3-208ENST00000479530 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
PDZRN3-208ENST00000479530 ERC2O15083 957 aa16.21■□□□□ 0.18
PDZRN3-208ENST00000479530 REC8O95072 547 aa16.21■□□□□ 0.18
PDZRN3-208ENST00000479530 GNAT3A8MTJ3 354 aa16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 PALD1Q9ULE6 856 aa16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 THEMISQ8N1K5 641 aaPredicted RBP16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 GDPD2Q9HCC8 539 aa16.2■□□□□ 0.18
PDZRN3-208ENST00000479530 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
PDZRN3-208ENST00000479530 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
PDZRN3-208ENST00000479530 PDE1AP54750 535 aa16.19■□□□□ 0.18
PDZRN3-208ENST00000479530 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
PDZRN3-208ENST00000479530 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
PDZRN3-208ENST00000479530 BRD1O95696 1058 aa16.18■□□□□ 0.18
PDZRN3-208ENST00000479530 CCT4P50991 539 aaKnown RBP16.18■□□□□ 0.18
PDZRN3-208ENST00000479530 GNAI2P04899 355 aa16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 LGR6Q9HBX8 967 aa16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 CCDC39Q9UFE4 941 aa16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 ARHGAP23Q9P227 1491 aa16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 KCNQ3O43525 872 aa16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 GADD45BO75293 160 aaPredicted RBP16.17■□□□□ 0.18
PDZRN3-208ENST00000479530 PIK3C2AO00443 1686 aa16.16■□□□□ 0.18
PDZRN3-208ENST00000479530 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
PDZRN3-208ENST00000479530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDZRN3-208ENST00000479530 NBPF6Q5VWK0 638 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 NBPF4Q96M43 638 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 ANXA1P04083 346 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
PDZRN3-208ENST00000479530 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms