RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 CEP126Q9P2H0 1117 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 NEO1Q92859 1461 aa17.09■□□□□ 0.33
COL20A1-206ENST00000479501 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
COL20A1-206ENST00000479501 FLT4P35916 1363 aa17.08■□□□□ 0.33
COL20A1-206ENST00000479501 KRT24Q2M2I5 525 aa17.08■□□□□ 0.33
COL20A1-206ENST00000479501 PIK3R4Q99570 1358 aa17.08■□□□□ 0.33
COL20A1-206ENST00000479501 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.32
COL20A1-206ENST00000479501 PDRG1Q9NUG6 133 aa17.08■□□□□ 0.32
COL20A1-206ENST00000479501 ESPNB1AK53 854 aa17.08■□□□□ 0.32
COL20A1-206ENST00000479501 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
COL20A1-206ENST00000479501 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 GPS2Q13227 327 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 ANXA1P04083 346 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 IL13P35225 146 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 MYD88Q99836 296 aa17.07■□□□□ 0.32
COL20A1-206ENST00000479501 LETM1O95202 739 aaPredicted RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 STK3Q13188 491 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 ZSCAN31Q96LW9 406 aaPredicted RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 MAP3K19Q56UN5 1328 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 SAFBQ15424 915 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 RRP9O43818 475 aaKnown RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
COL20A1-206ENST00000479501 EYA1Q99502 592 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
COL20A1-206ENST00000479501 SDF4Q9BRK5 362 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 BOLA2Q9H3K6 86 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
COL20A1-206ENST00000479501 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
COL20A1-206ENST00000479501 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 TEX35Q5T0J7 233 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 TRPM2O94759 1503 aa17.05■□□□□ 0.32
COL20A1-206ENST00000479501 SDSP20132 328 aa17.04■□□□□ 0.32
COL20A1-206ENST00000479501 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL20A1-206ENST00000479501 TNPO1Q92973 898 aaKnown RBP17.04■□□□□ 0.32
COL20A1-206ENST00000479501 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
COL20A1-206ENST00000479501 KCNA6P17658 529 aa17.04■□□□□ 0.32
COL20A1-206ENST00000479501 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
COL20A1-206ENST00000479501 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
COL20A1-206ENST00000479501 SEC24BO95487 1268 aa17.04■□□□□ 0.32
COL20A1-206ENST00000479501 KRT32Q14532 448 aa17.04■□□□□ 0.32
COL20A1-206ENST00000479501 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
COL20A1-206ENST00000479501 HMGN5P82970 282 aaKnown RBP17.03■□□□□ 0.32
COL20A1-206ENST00000479501 KRT85P78386 507 aa17.03■□□□□ 0.32
COL20A1-206ENST00000479501 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.32
COL20A1-206ENST00000479501 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
COL20A1-206ENST00000479501 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
COL20A1-206ENST00000479501 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
COL20A1-206ENST00000479501 SSFA2P28290 1259 aa17.03■□□□□ 0.32
COL20A1-206ENST00000479501 PRPF40BQ6NWY9 871 aaKnown RBP17.03■□□□□ 0.32
COL20A1-206ENST00000479501 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
COL20A1-206ENST00000479501 TPD52L1Q16890 204 aaPredicted RBP17.02■□□□□ 0.32
COL20A1-206ENST00000479501 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
COL20A1-206ENST00000479501 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
COL20A1-206ENST00000479501 PDE1AP54750 535 aa17.02■□□□□ 0.31
COL20A1-206ENST00000479501 FBXW7Q969H0 707 aa17.02■□□□□ 0.31
COL20A1-206ENST00000479501 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.31
COL20A1-206ENST00000479501 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.31
COL20A1-206ENST00000479501 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.31
COL20A1-206ENST00000479501 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
COL20A1-206ENST00000479501 UGGT1Q9NYU2 1555 aa17.01■□□□□ 0.31
COL20A1-206ENST00000479501 MARCH6O60337 910 aa17.01■□□□□ 0.31
COL20A1-206ENST00000479501 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
COL20A1-206ENST00000479501 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
COL20A1-206ENST00000479501 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
COL20A1-206ENST00000479501 HOOK1Q9UJC3 728 aaKnown RBP17.01■□□□□ 0.31
COL20A1-206ENST00000479501 A0A087WZG4 1122 aa17■□□□□ 0.31
COL20A1-206ENST00000479501 STARD3NLO95772 234 aa17■□□□□ 0.31
COL20A1-206ENST00000479501 KINO60870 393 aaKnown RBP17■□□□□ 0.31
COL20A1-206ENST00000479501 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
COL20A1-206ENST00000479501 ATP8B2P98198 1209 aa17■□□□□ 0.31
COL20A1-206ENST00000479501 CEP85Q6P2H3 762 aa17■□□□□ 0.31
COL20A1-206ENST00000479501 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
COL20A1-206ENST00000479501 CHD1O14646 1710 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 MYOM2P54296 1465 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
COL20A1-206ENST00000479501 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
COL20A1-206ENST00000479501 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
COL20A1-206ENST00000479501 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
COL20A1-206ENST00000479501 TRMT2AQ8IZ69 625 aaKnown RBP16.98■□□□□ 0.31
COL20A1-206ENST00000479501 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
COL20A1-206ENST00000479501 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
COL20A1-206ENST00000479501 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
COL20A1-206ENST00000479501 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
COL20A1-206ENST00000479501 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
COL20A1-206ENST00000479501 BCL11BQ9C0K0 894 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms