RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ERVV-2B6SEH9 535 aa9.15□□□□□ -0.95
BRCA1-215ENST00000478531 CCDC184Q52MB2 194 aa9.15□□□□□ -0.95
BRCA1-215ENST00000478531 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.95
BRCA1-215ENST00000478531 PROM2Q8N271 834 aa9.15□□□□□ -0.95
BRCA1-215ENST00000478531 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
BRCA1-215ENST00000478531 NFATC2IPQ8NCF5 419 aa9.14□□□□□ -0.95
BRCA1-215ENST00000478531 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-215ENST00000478531 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
BRCA1-215ENST00000478531 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-215ENST00000478531 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
BRCA1-215ENST00000478531 R3HDM1Q15032 1099 aaKnown RBP9.13□□□□□ -0.95
BRCA1-215ENST00000478531 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 PLEKHF1Q96S99 279 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 PNNQ9H307 717 aaKnown RBP9.13□□□□□ -0.95
BRCA1-215ENST00000478531 SLC52A2Q9HAB3 445 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 LRRC4BQ9NT99 713 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 ADAMTS8Q9UP79 889 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 MCM10Q7L590 875 aa9.13□□□□□ -0.95
BRCA1-215ENST00000478531 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
BRCA1-215ENST00000478531 SMARCC1Q92922 1105 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-215ENST00000478531 C4BP0C0L5 1744 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 TEFQ10587 303 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
BRCA1-215ENST00000478531 ATG3Q9NT62 314 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 UBR2Q8IWV8 1755 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 DCTN1Q14203 1278 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 IL17REQ8NFR9 667 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 STK32BQ9NY57 414 aa9.12□□□□□ -0.95
BRCA1-215ENST00000478531 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-215ENST00000478531 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-215ENST00000478531 TJP1Q07157 1748 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
BRCA1-215ENST00000478531 SIK1P57059 783 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 SLC39A6Q13433 755 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 RRP7AQ9Y3A4 280 aaKnown RBP9.11□□□□□ -0.95
BRCA1-215ENST00000478531 ZNF831Q5JPB2 1677 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 CEMIPQ8WUJ3 1361 aa9.11□□□□□ -0.95
BRCA1-215ENST00000478531 QSER1Q2KHR3 1735 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 RUNDC1Q96C34 613 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 KCPQ6ZWJ8 1503 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 SENP3-EIF4A1A0A087X0R7 540 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 RIPK4P57078 832 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 SLC15A2Q16348 729 aa9.1□□□□□ -0.95
BRCA1-215ENST00000478531 THUMPD2Q9BTF0 503 aaKnown RBP9.1□□□□□ -0.95
BRCA1-215ENST00000478531 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
BRCA1-215ENST00000478531 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
BRCA1-215ENST00000478531 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
BRCA1-215ENST00000478531 KDM3BQ7LBC6 1761 aa9.09□□□□□ -0.95
BRCA1-215ENST00000478531 MYH14Q7Z406 1995 aaKnown RBP9.09□□□□□ -0.96
BRCA1-215ENST00000478531 TMPOP42166 694 aaKnown RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 ITPK1Q13572 414 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 LINC00116Q8NCU8 138 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 RNF216Q9NWF9 866 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 CICQ96RK0 1608 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 GOLGB1Q14789 3259 aaKnown RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 BTBD11A6QL63 1104 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 HTATSF1O43719 755 aaKnown RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 PNISRQ8TF01 805 aaKnown RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 AK7Q96M32 723 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
BRCA1-215ENST00000478531 PDGFDQ9GZP0 370 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-215ENST00000478531 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
BRCA1-215ENST00000478531 APAF1O14727 1248 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 PHF14O94880 888 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 ZNF790Q6PG37 636 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 MIS18AQ9NYP9 233 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 C4AP0C0L4 1744 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 GNPATO15228 680 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 KCNQ3O43525 872 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 LRP5O75197 1615 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 LAMB4A4D0S4 1761 aa9.06□□□□□ -0.96
BRCA1-215ENST00000478531 ZBTB7AO95365 584 aa9.05□□□□□ -0.96
BRCA1-215ENST00000478531 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
BRCA1-215ENST00000478531 DNAJC10Q8IXB1 793 aa9.05□□□□□ -0.96
BRCA1-215ENST00000478531 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-215ENST00000478531 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-215ENST00000478531 AMIGO3Q86WK7 504 aa9.04□□□□□ -0.96
BRCA1-215ENST00000478531 FMNL2Q96PY5 1086 aa9.04□□□□□ -0.96
BRCA1-215ENST00000478531 TRIM35Q9UPQ4 493 aa9.04□□□□□ -0.96
BRCA1-215ENST00000478531 LAS1LQ9Y4W2 734 aaKnown RBP9.04□□□□□ -0.96
BRCA1-215ENST00000478531 HEG1Q9ULI3 1381 aa9.04□□□□□ -0.96
BRCA1-215ENST00000478531 HMGB2P26583 209 aaKnown RBP9.04□□□□□ -0.96
BRCA1-215ENST00000478531 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-215ENST00000478531 CRKLP46109 303 aaKnown RBP9.04□□□□□ -0.96
BRCA1-215ENST00000478531 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
BRCA1-215ENST00000478531 UTRNP46939 3433 aa9.03□□□□□ -0.96
BRCA1-215ENST00000478531 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
BRCA1-215ENST00000478531 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-215ENST00000478531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms