RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
HLA-DPA1-246ENST00000476642 CABP4P57796 275 aa17.42■□□□□ 0.38
HLA-DPA1-246ENST00000476642 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
HLA-DPA1-246ENST00000476642 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
HLA-DPA1-246ENST00000476642 PDGFDQ9GZP0 370 aaPredicted RBP17.42■□□□□ 0.38
HLA-DPA1-246ENST00000476642 KDM6AO15550 1401 aaPredicted RBP17.41■□□□□ 0.38
HLA-DPA1-246ENST00000476642 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
HLA-DPA1-246ENST00000476642 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
HLA-DPA1-246ENST00000476642 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
HLA-DPA1-246ENST00000476642 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
HLA-DPA1-246ENST00000476642 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
HLA-DPA1-246ENST00000476642 TEFQ10587 303 aa17.39■□□□□ 0.37
HLA-DPA1-246ENST00000476642 MTFR1LQ9H019 292 aa17.39■□□□□ 0.37
HLA-DPA1-246ENST00000476642 MRC1P22897 1456 aa17.38■□□□□ 0.37
HLA-DPA1-246ENST00000476642 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
HLA-DPA1-246ENST00000476642 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
HLA-DPA1-246ENST00000476642 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
HLA-DPA1-246ENST00000476642 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
HLA-DPA1-246ENST00000476642 PIGBQ92521 554 aa17.37■□□□□ 0.37
HLA-DPA1-246ENST00000476642 LY75O60449 1722 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 PTGER2P43116 358 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 RIPK4P57078 832 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 CEMIPQ8WUJ3 1361 aa17.36■□□□□ 0.37
HLA-DPA1-246ENST00000476642 FAM9BQ8IZU0 186 aa17.35■□□□□ 0.37
HLA-DPA1-246ENST00000476642 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
HLA-DPA1-246ENST00000476642 FHDC1Q9C0D6 1143 aaPredicted RBP17.35■□□□□ 0.37
HLA-DPA1-246ENST00000476642 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
HLA-DPA1-246ENST00000476642 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
HLA-DPA1-246ENST00000476642 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
HLA-DPA1-246ENST00000476642 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
HLA-DPA1-246ENST00000476642 NGEFQ8N5V2 710 aa17.33■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ARXQ96QS3 562 aa17.33■□□□□ 0.36
HLA-DPA1-246ENST00000476642 APAF1O14727 1248 aa17.32■□□□□ 0.36
HLA-DPA1-246ENST00000476642 MCM10Q7L590 875 aa17.32■□□□□ 0.36
HLA-DPA1-246ENST00000476642 MIER1Q8N108 512 aa17.32■□□□□ 0.36
HLA-DPA1-246ENST00000476642 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ZNF831Q5JPB2 1677 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
HLA-DPA1-246ENST00000476642 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
HLA-DPA1-246ENST00000476642 POLD1P28340 1107 aa17.3■□□□□ 0.36
HLA-DPA1-246ENST00000476642 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
HLA-DPA1-246ENST00000476642 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
HLA-DPA1-246ENST00000476642 KLHL34Q8N239 644 aa17.29■□□□□ 0.36
HLA-DPA1-246ENST00000476642 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
HLA-DPA1-246ENST00000476642 SGIP1Q9BQI5 828 aa17.29■□□□□ 0.36
HLA-DPA1-246ENST00000476642 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
HLA-DPA1-246ENST00000476642 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
HLA-DPA1-246ENST00000476642 LOC102724428A0A0B4J2F2 783 aa17.28■□□□□ 0.36
HLA-DPA1-246ENST00000476642 SIK1P57059 783 aa17.28■□□□□ 0.36
HLA-DPA1-246ENST00000476642 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
HLA-DPA1-246ENST00000476642 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
HLA-DPA1-246ENST00000476642 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
HLA-DPA1-246ENST00000476642 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
HLA-DPA1-246ENST00000476642 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
HLA-DPA1-246ENST00000476642 UBR2Q8IWV8 1755 aa17.27■□□□□ 0.35
HLA-DPA1-246ENST00000476642 C5P01031 1676 aa17.26■□□□□ 0.35
HLA-DPA1-246ENST00000476642 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
HLA-DPA1-246ENST00000476642 MSH5O43196 834 aa17.26■□□□□ 0.35
HLA-DPA1-246ENST00000476642 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
HLA-DPA1-246ENST00000476642 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
HLA-DPA1-246ENST00000476642 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
HLA-DPA1-246ENST00000476642 KCNQ4P56696 695 aa17.25■□□□□ 0.35
HLA-DPA1-246ENST00000476642 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
HLA-DPA1-246ENST00000476642 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
HLA-DPA1-246ENST00000476642 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
HLA-DPA1-246ENST00000476642 GPR162Q16538 588 aa17.24■□□□□ 0.35
HLA-DPA1-246ENST00000476642 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
HLA-DPA1-246ENST00000476642 PNPLA7Q6ZV29 1317 aa17.23■□□□□ 0.35
HLA-DPA1-246ENST00000476642 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
HLA-DPA1-246ENST00000476642 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
HLA-DPA1-246ENST00000476642 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
HLA-DPA1-246ENST00000476642 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
HLA-DPA1-246ENST00000476642 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
HLA-DPA1-246ENST00000476642 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
HLA-DPA1-246ENST00000476642 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 GNAI1P63096 354 aa17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
HLA-DPA1-246ENST00000476642 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
HLA-DPA1-246ENST00000476642 ZNF784Q8NCA9 323 aaPredicted RBP17.2■□□□□ 0.34
HLA-DPA1-246ENST00000476642 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
HLA-DPA1-246ENST00000476642 IL16Q14005 1332 aa17.2■□□□□ 0.34
HLA-DPA1-246ENST00000476642 TJP1Q07157 1748 aa17.19■□□□□ 0.34
HLA-DPA1-246ENST00000476642 STARD3NLO95772 234 aa17.19■□□□□ 0.34
HLA-DPA1-246ENST00000476642 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
HLA-DPA1-246ENST00000476642 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
HLA-DPA1-246ENST00000476642 FLAD1Q8NFF5 587 aa17.19■□□□□ 0.34
HLA-DPA1-246ENST00000476642 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms