RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
VPS13D-206ENST00000476045 LTBP4Q8N2S1 1624 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 VARSP26640 1264 aaKnown RBP6.55□□□□□ -1.36
VPS13D-206ENST00000476045 HSPA2P54652 639 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 EHBP1Q8NDI1 1231 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 BAP1Q92560 729 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 C1QTNF2Q9BXJ5 285 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
VPS13D-206ENST00000476045 NEURL4Q96JN8 1562 aa6.54□□□□□ -1.36
VPS13D-206ENST00000476045 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS13D-206ENST00000476045 SH3RF1Q7Z6J0 888 aa6.54□□□□□ -1.36
VPS13D-206ENST00000476045 POLR3EQ9NVU0 708 aa6.54□□□□□ -1.36
VPS13D-206ENST00000476045 CPS1P31327 1500 aa6.54□□□□□ -1.36
VPS13D-206ENST00000476045 TNRQ92752 1358 aa6.54□□□□□ -1.36
VPS13D-206ENST00000476045 UBR1Q8IWV7 1749 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 UGGT1Q9NYU2 1555 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 FGD6Q6ZV73 1430 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 LOC105371045A0A1W2PR82 267 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 NUTM2BA6NNL0 878 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-206ENST00000476045 NUTM2EB1AL46 878 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-206ENST00000476045 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 NUTM2DQ5VT03 806 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-206ENST00000476045 NUTM2AQ8IVF1 878 aaPredicted RBP6.53□□□□□ -1.36
VPS13D-206ENST00000476045 GPKOWQ92917 476 aaPredicted RBP eCLIP6.53□□□□□ -1.36
VPS13D-206ENST00000476045 CDK15Q96Q40 435 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 ERVK-7P63135 1459 aa6.53□□□□□ -1.36
VPS13D-206ENST00000476045 LMTK2Q8IWU2 1503 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 AXIN1O15169 862 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 TSPY4P0CV99 314 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 TSPY10P0CW01 314 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 CEBPAP49715 358 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-206ENST00000476045 BRPF1P55201 1214 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-206ENST00000476045 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 SH3BP5LQ7L8J4 393 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-206ENST00000476045 ARMC2Q8NEN0 867 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 HPS1Q92902 700 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 PCGF6Q9BYE7 350 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 ADGRL2O95490 1459 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 VWDEQ8N2E2 1590 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 GCC2Q8IWJ2 1684 aa6.52□□□□□ -1.37
VPS13D-206ENST00000476045 ZNF644Q9H582 1327 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-206ENST00000476045 DAPK1P53355 1430 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 ARHGAP31Q2M1Z3 1444 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 EFCAB6Q5THR3 1501 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 CTHP32929 405 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 ZNF787Q6DD87 383 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 TRMT44Q8IYL2 757 aaKnown RBP6.51□□□□□ -1.37
VPS13D-206ENST00000476045 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 TLL2Q9Y6L7 1015 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 KIF15Q9NS87 1388 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 MED14O60244 1454 aa6.51□□□□□ -1.37
VPS13D-206ENST00000476045 ZC3H4Q9UPT8 1303 aaKnown RBP6.5□□□□□ -1.37
VPS13D-206ENST00000476045 TET3O43151 1660 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 UNC13BO14795 1591 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 POTECB2RU33 542 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 ALDH1A1P00352 501 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 CTDSPL2Q05D32 466 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 GGT6Q6P531 493 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 MAP4K5Q9Y4K4 846 aa6.5□□□□□ -1.37
VPS13D-206ENST00000476045 RPRD2Q5VT52 1461 aaKnown RBP6.49□□□□□ -1.37
VPS13D-206ENST00000476045 CFAP65Q6ZU64 1925 aaKnown RBP6.49□□□□□ -1.37
VPS13D-206ENST00000476045 SOCS7O14512 581 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 KIF3BO15066 747 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-206ENST00000476045 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 KLF16Q9BXK1 252 aaPredicted RBP6.49□□□□□ -1.37
VPS13D-206ENST00000476045 ADGRB3O60242 1522 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 SLIT1O75093 1534 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 WASHC2CQ9Y4E1 1318 aa6.49□□□□□ -1.37
VPS13D-206ENST00000476045 KANK1Q14678 1352 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 ANKRD30AQ9BXX3 1397 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 PIK3C2BO00750 1634 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 ADH1CP00326 375 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 ATP13A2Q9NQ11 1180 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 ABCC5O15440 1437 aa6.48□□□□□ -1.37
VPS13D-206ENST00000476045 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
VPS13D-206ENST00000476045 ARHGAP23Q9P227 1491 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 RFC5P40937 340 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 NEUROD2Q15784 382 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-206ENST00000476045 LRRN4Q8WUT4 740 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 TSC1Q92574 1164 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 GMPR2Q9P2T1 348 aaKnown RBP6.47□□□□□ -1.37
VPS13D-206ENST00000476045 NPHP4O75161 1426 aaPredicted RBP6.47□□□□□ -1.37
VPS13D-206ENST00000476045 IQGAP3Q86VI3 1631 aa6.47□□□□□ -1.37
VPS13D-206ENST00000476045 USP17L8P0C7I0 530 aa6.46□□□□□ -1.38
VPS13D-206ENST00000476045 NNTQ13423 1086 aa6.46□□□□□ -1.38
VPS13D-206ENST00000476045 PDXDC2PQ6P474 469 aa6.46□□□□□ -1.38
VPS13D-206ENST00000476045 TRIM47Q96LD4 638 aa6.46□□□□□ -1.38
VPS13D-206ENST00000476045 FKBPLQ9UIM3 349 aa6.46□□□□□ -1.38
VPS13D-206ENST00000476045 NWD1Q149M9 1564 aa6.45□□□□□ -1.38
VPS13D-206ENST00000476045 GRM5P41594 1212 aa6.45□□□□□ -1.38
VPS13D-206ENST00000476045 NR5A1Q13285 461 aa6.45□□□□□ -1.38
VPS13D-206ENST00000476045 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-206ENST00000476045 ZNF775Q96BV0 537 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-206ENST00000476045 PCMTD1Q96MG8 357 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-206ENST00000476045 OCSTAMPQ9BR26 566 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms