RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
UBE3C-205ENST00000470408 WASF1Q92558 559 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 CCDC69A6NI79 296 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 NEK4P51957 841 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE3C-205ENST00000470408 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 MAGI2Q86UL8 1455 aa11.28□□□□□ -0.6
UBE3C-205ENST00000470408 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
UBE3C-205ENST00000470408 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
UBE3C-205ENST00000470408 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 MBD3O95983 291 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 TDO2P48775 406 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 DDB1Q16531 1140 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 RRP12Q5JTH9 1297 aaKnown RBP11.27□□□□□ -0.6
UBE3C-205ENST00000470408 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 UBAC1Q9BSL1 405 aa11.27□□□□□ -0.6
UBE3C-205ENST00000470408 YTHDC2Q9H6S0 1430 aaKnown RBP11.27□□□□□ -0.6
UBE3C-205ENST00000470408 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-205ENST00000470408 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-205ENST00000470408 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 CCDC70Q6NSX1 233 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 CWC25Q9NXE8 425 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-205ENST00000470408 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 IL2RBP14784 551 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.61
UBE3C-205ENST00000470408 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 WWC2Q6AWC2 1192 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 OLFM4Q6UX06 510 aa11.27□□□□□ -0.61
UBE3C-205ENST00000470408 FLIIQ13045 1269 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 RFC4P35249 363 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 PCMTD1Q96MG8 357 aaPredicted RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 SAMD9Q5K651 1589 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
UBE3C-205ENST00000470408 NCKAP5LQ9HCH0 1330 aa11.26□□□□□ -0.61
UBE3C-205ENST00000470408 ST5P78524 1137 aa11.25□□□□□ -0.61
UBE3C-205ENST00000470408 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 POLR3AO14802 1390 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 ABCC1P33527 1531 aa11.25□□□□□ -0.61
UBE3C-205ENST00000470408 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
UBE3C-205ENST00000470408 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
UBE3C-205ENST00000470408 ARHGEF10O15013 1369 aa11.25□□□□□ -0.61
UBE3C-205ENST00000470408 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 CHRNA2Q15822 529 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 SDF4Q9BRK5 362 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 THUMPD2Q9BTF0 503 aaKnown RBP11.24□□□□□ -0.61
UBE3C-205ENST00000470408 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
UBE3C-205ENST00000470408 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
UBE3C-205ENST00000470408 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 MIS18AQ9NYP9 233 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 NOM1Q5C9Z4 860 aaKnown RBP11.24□□□□□ -0.61
UBE3C-205ENST00000470408 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
UBE3C-205ENST00000470408 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
UBE3C-205ENST00000470408 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
UBE3C-205ENST00000470408 MX1P20591 662 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 CCDC173Q0VFZ6 552 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 GCP02774 474 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 IP6K1Q92551 441 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 KINO60870 393 aaKnown RBP11.23□□□□□ -0.61
UBE3C-205ENST00000470408 ATP2B2Q01814 1243 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 UQCRFS1P1P0C7P4 283 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 CCDC152Q4G0S7 254 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
UBE3C-205ENST00000470408 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 PLEKHH1Q9ULM0 1364 aa11.23□□□□□ -0.61
UBE3C-205ENST00000470408 TRAK2O60296 914 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 ABCF2Q9UG63 623 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 CCDC66A2RUB6 948 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
UBE3C-205ENST00000470408 STK38Q15208 465 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
UBE3C-205ENST00000470408 HSPA2P54652 639 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
UBE3C-205ENST00000470408 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
UBE3C-205ENST00000470408 ARHGEF5Q12774 1597 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 RRP9O43818 475 aaKnown RBP11.22□□□□□ -0.61
UBE3C-205ENST00000470408 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms