RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
HDAC6-216ENST00000468949 PHACTR3Q96KR7 559 aa10.64□□□□□ -0.71
HDAC6-216ENST00000468949 LRP5O75197 1615 aa10.63□□□□□ -0.71
HDAC6-216ENST00000468949 GNAT3A8MTJ3 354 aa10.63□□□□□ -0.71
HDAC6-216ENST00000468949 CALD1Q05682 793 aaKnown RBP10.63□□□□□ -0.71
HDAC6-216ENST00000468949 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
HDAC6-216ENST00000468949 IFNL2Q8IZJ0 200 aa10.63□□□□□ -0.71
HDAC6-216ENST00000468949 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
HDAC6-216ENST00000468949 MARCH10Q8NA82 808 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-216ENST00000468949 BTAF1O14981 1849 aa10.62□□□□□ -0.71
HDAC6-216ENST00000468949 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
HDAC6-216ENST00000468949 APBA3O96018 575 aa10.61□□□□□ -0.71
HDAC6-216ENST00000468949 PHKG2P15735 406 aa10.61□□□□□ -0.71
HDAC6-216ENST00000468949 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-216ENST00000468949 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
HDAC6-216ENST00000468949 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
HDAC6-216ENST00000468949 TEFQ10587 303 aa10.6□□□□□ -0.71
HDAC6-216ENST00000468949 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
HDAC6-216ENST00000468949 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
HDAC6-216ENST00000468949 CAMKK2Q96RR4 588 aa10.59□□□□□ -0.71
HDAC6-216ENST00000468949 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-216ENST00000468949 ZBTB12Q9Y330 459 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-216ENST00000468949 CYP27B1O15528 508 aa10.58□□□□□ -0.72
HDAC6-216ENST00000468949 EZH2Q15910 746 aaKnown RBP10.58□□□□□ -0.72
HDAC6-216ENST00000468949 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
HDAC6-216ENST00000468949 MCM10Q7L590 875 aa10.58□□□□□ -0.72
HDAC6-216ENST00000468949 SYTL4Q96C24 671 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-216ENST00000468949 LAS1LQ9Y4W2 734 aaKnown RBP10.58□□□□□ -0.72
HDAC6-216ENST00000468949 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
HDAC6-216ENST00000468949 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
HDAC6-216ENST00000468949 CABP4P57796 275 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 DCTN1Q14203 1278 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
HDAC6-216ENST00000468949 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
HDAC6-216ENST00000468949 THUMPD2Q9BTF0 503 aaKnown RBP10.56□□□□□ -0.72
HDAC6-216ENST00000468949 TMOD3Q9NYL9 352 aa10.56□□□□□ -0.72
HDAC6-216ENST00000468949 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
HDAC6-216ENST00000468949 LY75O60449 1722 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 E9PSI1 815 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 PLSCR1O15162 318 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 GNAI1P63096 354 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 TTC5Q8N0Z6 440 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-216ENST00000468949 IL16Q14005 1332 aa10.55□□□□□ -0.72
HDAC6-216ENST00000468949 CASZ1Q86V15 1759 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 DLG5Q8TDM6 1919 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-216ENST00000468949 ERVV-2B6SEH9 535 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-216ENST00000468949 PTF1AQ7RTS3 328 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 SLC52A2Q9HAB3 445 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 IFT57Q9NWB7 429 aa10.54□□□□□ -0.72
HDAC6-216ENST00000468949 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 CENPBP07199 599 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-216ENST00000468949 R3HDM1Q15032 1099 aaKnown RBP10.53□□□□□ -0.72
HDAC6-216ENST00000468949 TAF7Q15545 349 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-216ENST00000468949 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 ACSBG1Q96GR2 724 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 LGR6Q9HBX8 967 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 MRC1P22897 1456 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
HDAC6-216ENST00000468949 KCNQ2O43526 872 aa10.52□□□□□ -0.73
HDAC6-216ENST00000468949 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
HDAC6-216ENST00000468949 ZNF521Q96K83 1311 aa10.52□□□□□ -0.73
HDAC6-216ENST00000468949 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.73
HDAC6-216ENST00000468949 ITGB4P16144 1822 aa10.51□□□□□ -0.73
HDAC6-216ENST00000468949 C5P01031 1676 aa10.51□□□□□ -0.73
HDAC6-216ENST00000468949 PRIM1P49642 420 aaKnown RBP10.51□□□□□ -0.73
HDAC6-216ENST00000468949 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
HDAC6-216ENST00000468949 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
HDAC6-216ENST00000468949 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-216ENST00000468949 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
HDAC6-216ENST00000468949 ADAMTS7Q9UKP4 1686 aa10.5□□□□□ -0.73
HDAC6-216ENST00000468949 TSR2Q969E8 191 aaKnown RBP10.5□□□□□ -0.73
HDAC6-216ENST00000468949 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
HDAC6-216ENST00000468949 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
HDAC6-216ENST00000468949 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
HDAC6-216ENST00000468949 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
HDAC6-216ENST00000468949 SMARCC1Q92922 1105 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-216ENST00000468949 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
HDAC6-216ENST00000468949 MIS18AQ9NYP9 233 aa10.49□□□□□ -0.73
HDAC6-216ENST00000468949 CHL1O00533 1208 aa10.48□□□□□ -0.73
HDAC6-216ENST00000468949 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
HDAC6-216ENST00000468949 ZNF790Q6PG37 636 aa10.48□□□□□ -0.73
HDAC6-216ENST00000468949 PIGBQ92521 554 aa10.48□□□□□ -0.73
HDAC6-216ENST00000468949 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
HDAC6-216ENST00000468949 VIRMAQ69YN4 1812 aaKnown RBP10.48□□□□□ -0.73
HDAC6-216ENST00000468949 SLC39A6Q13433 755 aa10.47□□□□□ -0.73
HDAC6-216ENST00000468949 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
HDAC6-216ENST00000468949 CHMP4AQ9BY43 222 aa10.47□□□□□ -0.73
HDAC6-216ENST00000468949 STK32BQ9NY57 414 aa10.47□□□□□ -0.73
HDAC6-216ENST00000468949 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
HDAC6-216ENST00000468949 TAF1LQ8IZX4 1826 aa10.47□□□□□ -0.73
HDAC6-216ENST00000468949 KAT6BQ8WYB5 2073 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms