RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 NBPF14Q5TI25 921 aa18.12■□□□□ 0.49
LIMD1-203ENST00000465039 PROM2Q8N271 834 aa18.12■□□□□ 0.49
LIMD1-203ENST00000465039 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
LIMD1-203ENST00000465039 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
LIMD1-203ENST00000465039 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
LIMD1-203ENST00000465039 TEFQ10587 303 aa18.1■□□□□ 0.49
LIMD1-203ENST00000465039 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
LIMD1-203ENST00000465039 UBR2Q8IWV8 1755 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 C5P01031 1676 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
LIMD1-203ENST00000465039 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
LIMD1-203ENST00000465039 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
LIMD1-203ENST00000465039 TAF1LQ8IZX4 1826 aa18.08■□□□□ 0.48
LIMD1-203ENST00000465039 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
LIMD1-203ENST00000465039 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
LIMD1-203ENST00000465039 SIK1P57059 783 aa18.07■□□□□ 0.48
LIMD1-203ENST00000465039 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
LIMD1-203ENST00000465039 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
LIMD1-203ENST00000465039 KCPQ6ZWJ8 1503 aa18.05■□□□□ 0.48
LIMD1-203ENST00000465039 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
LIMD1-203ENST00000465039 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
LIMD1-203ENST00000465039 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
LIMD1-203ENST00000465039 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
LIMD1-203ENST00000465039 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
LIMD1-203ENST00000465039 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
LIMD1-203ENST00000465039 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
LIMD1-203ENST00000465039 RIPK4P57078 832 aa18.03■□□□□ 0.48
LIMD1-203ENST00000465039 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
LIMD1-203ENST00000465039 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
LIMD1-203ENST00000465039 ZNF790Q6PG37 636 aa18.02■□□□□ 0.48
LIMD1-203ENST00000465039 MCM10Q7L590 875 aa18.02■□□□□ 0.48
LIMD1-203ENST00000465039 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
LIMD1-203ENST00000465039 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
LIMD1-203ENST00000465039 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
LIMD1-203ENST00000465039 CCDC146Q8IYE0 955 aa18.01■□□□□ 0.47
LIMD1-203ENST00000465039 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
LIMD1-203ENST00000465039 KDM3BQ7LBC6 1761 aa18.01■□□□□ 0.47
LIMD1-203ENST00000465039 TJP1Q07157 1748 aa18.01■□□□□ 0.47
LIMD1-203ENST00000465039 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
LIMD1-203ENST00000465039 CASZ1Q86V15 1759 aa18■□□□□ 0.47
LIMD1-203ENST00000465039 ATP6V1AP38606 617 aa18■□□□□ 0.47
LIMD1-203ENST00000465039 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
LIMD1-203ENST00000465039 CCDC27Q2M243 656 aa18■□□□□ 0.47
LIMD1-203ENST00000465039 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
LIMD1-203ENST00000465039 RC3H1Q5TC82 1133 aaKnown RBP17.99■□□□□ 0.47
LIMD1-203ENST00000465039 FLAD1Q8NFF5 587 aa17.99■□□□□ 0.47
LIMD1-203ENST00000465039 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
LIMD1-203ENST00000465039 APAF1O14727 1248 aa17.98■□□□□ 0.47
LIMD1-203ENST00000465039 R3HDM1Q15032 1099 aaKnown RBP17.98■□□□□ 0.47
LIMD1-203ENST00000465039 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
LIMD1-203ENST00000465039 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
LIMD1-203ENST00000465039 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
LIMD1-203ENST00000465039 ITPK1Q13572 414 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
LIMD1-203ENST00000465039 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 LRP5O75197 1615 aa17.97■□□□□ 0.47
LIMD1-203ENST00000465039 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
LIMD1-203ENST00000465039 ADRA2BP18089 450 aa17.96■□□□□ 0.47
LIMD1-203ENST00000465039 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
LIMD1-203ENST00000465039 AK7Q96M32 723 aa17.96■□□□□ 0.47
LIMD1-203ENST00000465039 SSFA2P28290 1259 aa17.95■□□□□ 0.46
LIMD1-203ENST00000465039 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
LIMD1-203ENST00000465039 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
LIMD1-203ENST00000465039 SLC16A10Q8TF71 515 aa17.95■□□□□ 0.46
LIMD1-203ENST00000465039 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
LIMD1-203ENST00000465039 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
LIMD1-203ENST00000465039 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
LIMD1-203ENST00000465039 STARD3NLO95772 234 aa17.93■□□□□ 0.46
LIMD1-203ENST00000465039 KCNQ4P56696 695 aa17.93■□□□□ 0.46
LIMD1-203ENST00000465039 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
LIMD1-203ENST00000465039 PNPLA7Q6ZV29 1317 aa17.93■□□□□ 0.46
LIMD1-203ENST00000465039 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
LIMD1-203ENST00000465039 PSDA5PKW4 1024 aaPredicted RBP17.92■□□□□ 0.46
LIMD1-203ENST00000465039 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
LIMD1-203ENST00000465039 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
LIMD1-203ENST00000465039 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
LIMD1-203ENST00000465039 IL16Q14005 1332 aa17.92■□□□□ 0.46
LIMD1-203ENST00000465039 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
LIMD1-203ENST00000465039 CHL1O00533 1208 aa17.91■□□□□ 0.46
LIMD1-203ENST00000465039 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
LIMD1-203ENST00000465039 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
LIMD1-203ENST00000465039 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
LIMD1-203ENST00000465039 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
LIMD1-203ENST00000465039 RPS6KA4O75676 772 aa17.9■□□□□ 0.46
LIMD1-203ENST00000465039 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
LIMD1-203ENST00000465039 DNAJC10Q8IXB1 793 aa17.9■□□□□ 0.46
LIMD1-203ENST00000465039 MTFR1LQ9H019 292 aa17.9■□□□□ 0.46
LIMD1-203ENST00000465039 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
LIMD1-203ENST00000465039 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
LIMD1-203ENST00000465039 RTCBQ9Y3I0 505 aaKnown RBP17.9■□□□□ 0.46
LIMD1-203ENST00000465039 GNPATO15228 680 aa17.89■□□□□ 0.45
LIMD1-203ENST00000465039 GNAI1P63096 354 aa17.89■□□□□ 0.45
LIMD1-203ENST00000465039 WWC1Q8IX03 1113 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms