RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 MCM10Q7L590 875 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 POLD1P28340 1107 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 ST5P78524 1137 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
AMBRA1-202ENST00000458649 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 CDC5LQ99459 802 aaKnown RBP12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 ACEP12821 1306 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 TRMT112Q9UI30 125 aaKnown RBP12.7□□□□□ -0.38
AMBRA1-202ENST00000458649 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 TDO2P48775 406 aa12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 SIL1Q9H173 461 aa12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 DDB1Q16531 1140 aa12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 EPS15P42566 896 aa12.69□□□□□ -0.38
AMBRA1-202ENST00000458649 CCDC69A6NI79 296 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 DEF6Q9H4E7 631 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 CDKL5O76039 1030 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 TSPYL1Q9H0U9 437 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 SLC5A1P13866 664 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 RABEP1Q15276 862 aa12.68□□□□□ -0.38
AMBRA1-202ENST00000458649 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 AACSQ86V21 672 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 MNS1Q8NEH6 495 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 LDHCP07864 332 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 IL16Q14005 1332 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 USP8P40818 1118 aa12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 TTLL12Q14166 644 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
AMBRA1-202ENST00000458649 KRT32Q14532 448 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 ODF2Q5BJF6 829 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 DZIP1Q86YF9 867 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 NEK4P51957 841 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 AIDAQ96BJ3 306 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
AMBRA1-202ENST00000458649 ATP10AO60312 1499 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 TRIM27P14373 513 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 USP5P45974 858 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 CDR1P51861 262 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 SASS6Q6UVJ0 657 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 TRPM2O94759 1503 aa12.65□□□□□ -0.38
AMBRA1-202ENST00000458649 MYO1BO43795 1136 aa12.65□□□□□ -0.39
AMBRA1-202ENST00000458649 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.39
AMBRA1-202ENST00000458649 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.39
AMBRA1-202ENST00000458649 ABCF2Q9UG63 623 aa12.65□□□□□ -0.39
AMBRA1-202ENST00000458649 MAST1Q9Y2H9 1570 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 HSPA2P54652 639 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 MYD88Q99836 296 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 C6orf229H3BNL8 230 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 MAP3K12Q12852 859 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 CYP46A1Q9Y6A2 500 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 WASF1Q92558 559 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 KIF1BPQ96EK5 621 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 CARD14Q9BXL6 1004 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 OFD1O75665 1012 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 TNIP1Q15025 636 aa12.64□□□□□ -0.39
AMBRA1-202ENST00000458649 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 PDIA4P13667 645 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 FBLN1P23142 703 aa12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 CHRNA2Q15822 529 aa12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
AMBRA1-202ENST00000458649 GCC2Q8IWJ2 1684 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms