RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 FLIIQ13045 1269 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 ZSCAN23Q3MJ62 389 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
SCFD1-203ENST00000458591 IL25Q9H293 177 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 CEP170BQ9Y4F5 1589 aaPredicted RBP17.34■□□□□ 0.37
SCFD1-203ENST00000458591 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
SCFD1-203ENST00000458591 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
SCFD1-203ENST00000458591 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
SCFD1-203ENST00000458591 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
SCFD1-203ENST00000458591 AMOTL2Q9Y2J4 779 aa17.34■□□□□ 0.37
SCFD1-203ENST00000458591 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
SCFD1-203ENST00000458591 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.37
SCFD1-203ENST00000458591 REC8O95072 547 aa17.33■□□□□ 0.37
SCFD1-203ENST00000458591 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.37
SCFD1-203ENST00000458591 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.37
SCFD1-203ENST00000458591 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.37
SCFD1-203ENST00000458591 RBSNQ9H1K0 784 aa17.33■□□□□ 0.36
SCFD1-203ENST00000458591 LRRFIP2Q9Y608 721 aaKnown RBP17.33■□□□□ 0.36
SCFD1-203ENST00000458591 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 IL17REQ8NFR9 667 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 ESYT1Q9BSJ8 1104 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
SCFD1-203ENST00000458591 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
SCFD1-203ENST00000458591 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
SCFD1-203ENST00000458591 NLRP6P59044 892 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 DTNBO60941 627 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 MX1P20591 662 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 NUTM1Q86Y26 1132 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
SCFD1-203ENST00000458591 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
SCFD1-203ENST00000458591 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
SCFD1-203ENST00000458591 CHMLP26374 656 aa17.29■□□□□ 0.36
SCFD1-203ENST00000458591 ATP8B2P98198 1209 aa17.29■□□□□ 0.36
SCFD1-203ENST00000458591 TMEM63CQ9P1W3 806 aa17.29■□□□□ 0.36
SCFD1-203ENST00000458591 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
SCFD1-203ENST00000458591 FLT4P35916 1363 aa17.29■□□□□ 0.36
SCFD1-203ENST00000458591 CWC22Q9HCG8 908 aaKnown RBP17.29■□□□□ 0.36
SCFD1-203ENST00000458591 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 ZNF445P59923 1031 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 CCDC173Q0VFZ6 552 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 TPRNQ4KMQ1 711 aa17.28■□□□□ 0.36
SCFD1-203ENST00000458591 LARP6Q9BRS8 491 aaKnown RBP17.28■□□□□ 0.36
SCFD1-203ENST00000458591 CCDC30Q5VVM6 783 aa17.27■□□□□ 0.36
SCFD1-203ENST00000458591 SYCE3A1L190 88 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 EIF2S2P20042 333 aaKnown RBP17.26■□□□□ 0.35
SCFD1-203ENST00000458591 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
SCFD1-203ENST00000458591 KDRP35968 1356 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 ANXA1P04083 346 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 HOXC9P31274 260 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
SCFD1-203ENST00000458591 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
SCFD1-203ENST00000458591 UBR1Q8IWV7 1749 aa17.25■□□□□ 0.35
SCFD1-203ENST00000458591 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
SCFD1-203ENST00000458591 PLEKHG1Q9ULL1 1385 aa17.25■□□□□ 0.35
SCFD1-203ENST00000458591 GNAI3P08754 354 aa17.24■□□□□ 0.35
SCFD1-203ENST00000458591 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
SCFD1-203ENST00000458591 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
SCFD1-203ENST00000458591 KCNQ3O43525 872 aa17.24■□□□□ 0.35
SCFD1-203ENST00000458591 RNF214Q8ND24 703 aa17.24■□□□□ 0.35
SCFD1-203ENST00000458591 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
SCFD1-203ENST00000458591 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
SCFD1-203ENST00000458591 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
SCFD1-203ENST00000458591 LGR6Q9HBX8 967 aa17.23■□□□□ 0.35
SCFD1-203ENST00000458591 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 HDGFL1Q5TGJ6 251 aa17.22■□□□□ 0.35
SCFD1-203ENST00000458591 GADD45BO75293 160 aaPredicted RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
SCFD1-203ENST00000458591 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
SCFD1-203ENST00000458591 BRD1O95696 1058 aa17.21■□□□□ 0.35
SCFD1-203ENST00000458591 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
SCFD1-203ENST00000458591 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
SCFD1-203ENST00000458591 CPA1P15085 419 aa17.2■□□□□ 0.34
SCFD1-203ENST00000458591 CUL4AQ13619 759 aa17.2■□□□□ 0.34
SCFD1-203ENST00000458591 ZSCAN30Q86W11 494 aa17.2■□□□□ 0.34
SCFD1-203ENST00000458591 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
SCFD1-203ENST00000458591 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
SCFD1-203ENST00000458591 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
SCFD1-203ENST00000458591 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
SCFD1-203ENST00000458591 KCNA6P17658 529 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 MCCP23508 829 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 RRP9O43818 475 aaKnown RBP17.18■□□□□ 0.34
SCFD1-203ENST00000458591 LRSAM1Q6UWE0 723 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 MPNDQ8N594 471 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
SCFD1-203ENST00000458591 CHPF2Q9P2E5 772 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms