RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ANTXR1Q9H6X2 564 aa19.64■□□□□ 0.73
LSS-205ENST00000457828 VPS37CA5D8V6 355 aaPredicted RBP19.63■□□□□ 0.73
LSS-205ENST00000457828 SNX21Q969T3 373 aa19.63■□□□□ 0.73
LSS-205ENST00000457828 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
LSS-205ENST00000457828 HSP90B1P14625 803 aaKnown RBP19.63■□□□□ 0.73
LSS-205ENST00000457828 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
LSS-205ENST00000457828 PLXNC1O60486 1568 aa19.63■□□□□ 0.73
LSS-205ENST00000457828 UPF3BQ9BZI7 483 aaKnown RBP19.62■□□□□ 0.73
LSS-205ENST00000457828 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 TSPY26PQ9H489 355 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 UQCRHP07919 91 aa19.62■□□□□ 0.73
LSS-205ENST00000457828 SLC39A6Q13433 755 aa19.61■□□□□ 0.73
LSS-205ENST00000457828 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
LSS-205ENST00000457828 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
LSS-205ENST00000457828 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
LSS-205ENST00000457828 CCDC85AQ96PX6 553 aaPredicted RBP19.61■□□□□ 0.73
LSS-205ENST00000457828 SMC3Q9UQE7 1217 aa19.61■□□□□ 0.73
LSS-205ENST00000457828 ATP6V1DQ9Y5K8 247 aa19.61■□□□□ 0.73
LSS-205ENST00000457828 FIBPO43427 364 aa19.6■□□□□ 0.73
LSS-205ENST00000457828 EDC4Q6P2E9 1401 aaKnown RBP19.6■□□□□ 0.73
LSS-205ENST00000457828 GOLGA6L6A8MZA4 724 aa19.6■□□□□ 0.73
LSS-205ENST00000457828 GNAI2P04899 355 aa19.6■□□□□ 0.73
LSS-205ENST00000457828 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
LSS-205ENST00000457828 RPAP2Q8IXW5 612 aaPredicted RBP19.6■□□□□ 0.73
LSS-205ENST00000457828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.59■□□□□ 0.73
LSS-205ENST00000457828 IL16Q14005 1332 aa19.59■□□□□ 0.73
LSS-205ENST00000457828 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
LSS-205ENST00000457828 ZPR1O75312 459 aa19.58■□□□□ 0.73
LSS-205ENST00000457828 MAP4K4O95819 1239 aaPredicted RBP19.58■□□□□ 0.73
LSS-205ENST00000457828 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.73
LSS-205ENST00000457828 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.73
LSS-205ENST00000457828 GDPD2Q9HCC8 539 aa19.58■□□□□ 0.73
LSS-205ENST00000457828 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.73
LSS-205ENST00000457828 A2ML1A8K2U0 1454 aa19.58■□□□□ 0.72
LSS-205ENST00000457828 F6X3S4 739 aa19.58■□□□□ 0.72
LSS-205ENST00000457828 ANXA1P04083 346 aa19.58■□□□□ 0.72
LSS-205ENST00000457828 RBM25P49756 843 aaKnown RBP19.58■□□□□ 0.72
LSS-205ENST00000457828 PHACTR3Q96KR7 559 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 CLASRPQ8N2M8 674 aaKnown RBP19.57■□□□□ 0.72
LSS-205ENST00000457828 SIL1Q9H173 461 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 IL1RAPL2Q9NP60 686 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 ZSCAN23Q3MJ62 389 aa19.57■□□□□ 0.72
LSS-205ENST00000457828 MCM2P49736 904 aa19.56■□□□□ 0.72
LSS-205ENST00000457828 ZMYND15Q9H091 742 aa19.56■□□□□ 0.72
LSS-205ENST00000457828 C8orf58Q8NAV2 365 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 ZBTB3Q9H5J0 574 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 AKAP4Q5JQC9 854 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 TTC22Q5TAA0 569 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
LSS-205ENST00000457828 DBF4Q9UBU7 674 aaPredicted RBP19.55■□□□□ 0.72
LSS-205ENST00000457828 TET3O43151 1660 aa19.54■□□□□ 0.72
LSS-205ENST00000457828 VAMP4O75379 141 aa19.54■□□□□ 0.72
LSS-205ENST00000457828 SDSP20132 328 aa19.54■□□□□ 0.72
LSS-205ENST00000457828 MRPL50Q8N5N7 158 aaKnown RBP19.54■□□□□ 0.72
LSS-205ENST00000457828 MAP7D2Q96T17 732 aa19.54■□□□□ 0.72
LSS-205ENST00000457828 FAM98CQ17RN3 349 aaKnown RBP19.54■□□□□ 0.72
LSS-205ENST00000457828 GAS2L3Q86XJ1 694 aa19.54■□□□□ 0.72
LSS-205ENST00000457828 ZGPATQ8N5A5 531 aaKnown RBP19.54■□□□□ 0.72
LSS-205ENST00000457828 APPP05067 770 aa19.53■□□□□ 0.72
LSS-205ENST00000457828 MPHOSPH8Q99549 860 aa19.53■□□□□ 0.72
LSS-205ENST00000457828 NOL10Q9BSC4 688 aaKnown RBP19.53■□□□□ 0.72
LSS-205ENST00000457828 ZBTB7BO15156 539 aaPredicted RBP19.53■□□□□ 0.72
LSS-205ENST00000457828 CCDC57Q2TAC2 916 aa19.53■□□□□ 0.72
LSS-205ENST00000457828 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
LSS-205ENST00000457828 USP21Q9UK80 565 aa19.53■□□□□ 0.72
LSS-205ENST00000457828 HMGB2P26583 209 aaKnown RBP19.53■□□□□ 0.72
LSS-205ENST00000457828 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
LSS-205ENST00000457828 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
LSS-205ENST00000457828 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
LSS-205ENST00000457828 GPTP24298 496 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 PRIM1P49642 420 aaKnown RBP19.52■□□□□ 0.72
LSS-205ENST00000457828 SPC24Q8NBT2 197 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 MYD88Q99836 296 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 ZKSCAN1P17029 563 aaPredicted RBP19.52■□□□□ 0.72
LSS-205ENST00000457828 AK7Q96M32 723 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 DIP2CQ9Y2E4 1556 aa19.52■□□□□ 0.72
LSS-205ENST00000457828 ZNF592Q92610 1267 aa19.52■□□□□ 0.71
LSS-205ENST00000457828 SRGAP3O43295 1099 aa19.51■□□□□ 0.71
LSS-205ENST00000457828 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
LSS-205ENST00000457828 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
LSS-205ENST00000457828 MEIS3Q99687 375 aa19.51■□□□□ 0.71
LSS-205ENST00000457828 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
LSS-205ENST00000457828 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
LSS-205ENST00000457828 TEX13AQ9BXU3 409 aaPredicted RBP19.51■□□□□ 0.71
LSS-205ENST00000457828 MYOM2P54296 1465 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 NBPF6Q5VWK0 638 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 NBPF4Q96M43 638 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 POLR1AO95602 1720 aaPredicted RBP19.5■□□□□ 0.71
LSS-205ENST00000457828 SBNO1A3KN83 1393 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
LSS-205ENST00000457828 OTUD7AQ8TE49 926 aaPredicted RBP19.5■□□□□ 0.71
LSS-205ENST00000457828 RUFY2Q8WXA3 655 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms