RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
LINC01563-201ENST00000456235 ADAMTS8Q9UP79 889 aa18.69■□□□□ 0.58
LINC01563-201ENST00000456235 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
LINC01563-201ENST00000456235 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
LINC01563-201ENST00000456235 TJP1Q07157 1748 aa18.69■□□□□ 0.58
LINC01563-201ENST00000456235 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
LINC01563-201ENST00000456235 ZNF827Q17R98 1081 aa18.68■□□□□ 0.58
LINC01563-201ENST00000456235 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
LINC01563-201ENST00000456235 ATG3Q9NT62 314 aa18.68■□□□□ 0.58
LINC01563-201ENST00000456235 C4BP0C0L5 1744 aa18.67■□□□□ 0.58
LINC01563-201ENST00000456235 ERVV-2B6SEH9 535 aa18.67■□□□□ 0.58
LINC01563-201ENST00000456235 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
LINC01563-201ENST00000456235 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
LINC01563-201ENST00000456235 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
LINC01563-201ENST00000456235 CASZ1Q86V15 1759 aa18.66■□□□□ 0.58
LINC01563-201ENST00000456235 UBR2Q8IWV8 1755 aa18.66■□□□□ 0.58
LINC01563-201ENST00000456235 RBM42Q9BTD8 480 aaKnown RBP18.66■□□□□ 0.58
LINC01563-201ENST00000456235 PDGFDQ9GZP0 370 aaPredicted RBP18.66■□□□□ 0.58
LINC01563-201ENST00000456235 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
LINC01563-201ENST00000456235 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
LINC01563-201ENST00000456235 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
LINC01563-201ENST00000456235 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.58
LINC01563-201ENST00000456235 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
LINC01563-201ENST00000456235 NEFMP07197 916 aa18.64■□□□□ 0.57
LINC01563-201ENST00000456235 SMIM5Q71RC9 77 aa18.64■□□□□ 0.57
LINC01563-201ENST00000456235 ITPK1Q13572 414 aa18.63■□□□□ 0.57
LINC01563-201ENST00000456235 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
LINC01563-201ENST00000456235 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
LINC01563-201ENST00000456235 SLC4A9Q96Q91 983 aa18.63■□□□□ 0.57
LINC01563-201ENST00000456235 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
LINC01563-201ENST00000456235 LOC102724428A0A0B4J2F2 783 aa18.62■□□□□ 0.57
LINC01563-201ENST00000456235 SIK1P57059 783 aa18.62■□□□□ 0.57
LINC01563-201ENST00000456235 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
LINC01563-201ENST00000456235 SMARCC1Q92922 1105 aaPredicted RBP18.62■□□□□ 0.57
LINC01563-201ENST00000456235 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
LINC01563-201ENST00000456235 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
LINC01563-201ENST00000456235 TEFQ10587 303 aa18.61■□□□□ 0.57
LINC01563-201ENST00000456235 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
LINC01563-201ENST00000456235 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 KCNQ3O43525 872 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 SLC15A2Q16348 729 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
LINC01563-201ENST00000456235 RIPK4P57078 832 aa18.59■□□□□ 0.57
LINC01563-201ENST00000456235 AMIGO3Q86WK7 504 aa18.59■□□□□ 0.57
LINC01563-201ENST00000456235 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
LINC01563-201ENST00000456235 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
LINC01563-201ENST00000456235 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
LINC01563-201ENST00000456235 AKT1S1Q96B36 256 aa18.58■□□□□ 0.56
LINC01563-201ENST00000456235 MYH14Q7Z406 1995 aaKnown RBP18.57■□□□□ 0.56
LINC01563-201ENST00000456235 PHF14O94880 888 aa18.57■□□□□ 0.56
LINC01563-201ENST00000456235 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
LINC01563-201ENST00000456235 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
LINC01563-201ENST00000456235 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
LINC01563-201ENST00000456235 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
LINC01563-201ENST00000456235 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
LINC01563-201ENST00000456235 APAF1O14727 1248 aa18.56■□□□□ 0.56
LINC01563-201ENST00000456235 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
LINC01563-201ENST00000456235 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
LINC01563-201ENST00000456235 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
LINC01563-201ENST00000456235 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
LINC01563-201ENST00000456235 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
LINC01563-201ENST00000456235 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
LINC01563-201ENST00000456235 MSH5O43196 834 aa18.54■□□□□ 0.56
LINC01563-201ENST00000456235 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
LINC01563-201ENST00000456235 AK7Q96M32 723 aa18.54■□□□□ 0.56
LINC01563-201ENST00000456235 PRAMEF22A3QJZ6 481 aa18.53■□□□□ 0.56
LINC01563-201ENST00000456235 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
LINC01563-201ENST00000456235 GNPATO15228 680 aa18.52■□□□□ 0.56
LINC01563-201ENST00000456235 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
LINC01563-201ENST00000456235 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
LINC01563-201ENST00000456235 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
LINC01563-201ENST00000456235 LRP5O75197 1615 aa18.52■□□□□ 0.55
LINC01563-201ENST00000456235 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
LINC01563-201ENST00000456235 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
LINC01563-201ENST00000456235 MIER1Q8N108 512 aa18.51■□□□□ 0.55
LINC01563-201ENST00000456235 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
LINC01563-201ENST00000456235 MSL1Q68DK7 614 aa18.5■□□□□ 0.55
LINC01563-201ENST00000456235 COL23A1Q86Y22 540 aaPredicted RBP18.5■□□□□ 0.55
LINC01563-201ENST00000456235 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
LINC01563-201ENST00000456235 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
LINC01563-201ENST00000456235 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
LINC01563-201ENST00000456235 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
LINC01563-201ENST00000456235 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
LINC01563-201ENST00000456235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
LINC01563-201ENST00000456235 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
LINC01563-201ENST00000456235 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
LINC01563-201ENST00000456235 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
LINC01563-201ENST00000456235 ZBTB1Q9Y2K1 713 aa18.46■□□□□ 0.55
LINC01563-201ENST00000456235 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
LINC01563-201ENST00000456235 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
LINC01563-201ENST00000456235 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
LINC01563-201ENST00000456235 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
LINC01563-201ENST00000456235 CYP19A1P11511 503 aaPredicted RBP18.44■□□□□ 0.54
LINC01563-201ENST00000456235 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
LINC01563-201ENST00000456235 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
LINC01563-201ENST00000456235 CCDC87Q9NVE4 849 aa18.43■□□□□ 0.54
LINC01563-201ENST00000456235 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms