RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 PSDA5PKW4 1024 aaPredicted RBP9.13□□□□□ -0.95
NCL-206ENST00000454824 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
NCL-206ENST00000454824 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
NCL-206ENST00000454824 MTHFSDQ2M296 383 aaKnown RBP9.13□□□□□ -0.95
NCL-206ENST00000454824 STK32BQ9NY57 414 aa9.13□□□□□ -0.95
NCL-206ENST00000454824 KDRP35968 1356 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 PLEKHG2Q9H7P9 1386 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 TEFQ10587 303 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
NCL-206ENST00000454824 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 PIGBQ92521 554 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
NCL-206ENST00000454824 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
NCL-206ENST00000454824 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
NCL-206ENST00000454824 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
NCL-206ENST00000454824 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
NCL-206ENST00000454824 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
NCL-206ENST00000454824 PKD1L3Q7Z443 1732 aa9.11□□□□□ -0.95
NCL-206ENST00000454824 NHSQ6T4R5 1651 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 BTAF1O14981 1849 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 COL3A1P02461 1466 aaPredicted RBP9.1□□□□□ -0.95
NCL-206ENST00000454824 RNMTO43148 476 aaKnown RBP9.1□□□□□ -0.95
NCL-206ENST00000454824 KCNQ4P56696 695 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 DOT1LQ8TEK3 1739 aa9.1□□□□□ -0.95
NCL-206ENST00000454824 SHANK3Q9BYB0 1731 aa9.09□□□□□ -0.95
NCL-206ENST00000454824 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
NCL-206ENST00000454824 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
NCL-206ENST00000454824 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
NCL-206ENST00000454824 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
NCL-206ENST00000454824 MAP3K5Q99683 1374 aa9.09□□□□□ -0.95
NCL-206ENST00000454824 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 ITGB4P16144 1822 aa9.08□□□□□ -0.96
NCL-206ENST00000454824 LOC102724428A0A0B4J2F2 783 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 SIK1P57059 783 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 RIPK4P57078 832 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 MCM10Q7L590 875 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 RUNDC1Q96C34 613 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 AK7Q96M32 723 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
NCL-206ENST00000454824 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 HTATSF1O43719 755 aaKnown RBP9.06□□□□□ -0.96
NCL-206ENST00000454824 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 MIER1Q8N108 512 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
NCL-206ENST00000454824 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
NCL-206ENST00000454824 DCTN1Q14203 1278 aa9.05□□□□□ -0.96
NCL-206ENST00000454824 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
NCL-206ENST00000454824 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
NCL-206ENST00000454824 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
NCL-206ENST00000454824 ANO8Q9HCE9 1232 aaPredicted RBP9.05□□□□□ -0.96
NCL-206ENST00000454824 RRP7AQ9Y3A4 280 aaKnown RBP9.05□□□□□ -0.96
NCL-206ENST00000454824 RGPD3A6NKT7 1758 aaPredicted RBP9.04□□□□□ -0.96
NCL-206ENST00000454824 RGPD4Q7Z3J3 1758 aa9.04□□□□□ -0.96
NCL-206ENST00000454824 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
NCL-206ENST00000454824 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
NCL-206ENST00000454824 FAM9BQ8IZU0 186 aa9.04□□□□□ -0.96
NCL-206ENST00000454824 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
NCL-206ENST00000454824 SPON1Q9HCB6 807 aa9.04□□□□□ -0.96
NCL-206ENST00000454824 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
NCL-206ENST00000454824 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
NCL-206ENST00000454824 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 TOGARAM1Q9Y4F4 1720 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 PHF14O94880 888 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 ZBTB7AO95365 584 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 TMPOP42166 694 aaKnown RBP9.03□□□□□ -0.96
NCL-206ENST00000454824 ZNF827Q17R98 1081 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 CCDC184Q52MB2 194 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
NCL-206ENST00000454824 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
NCL-206ENST00000454824 LAS1LQ9Y4W2 734 aaKnown RBP9.03□□□□□ -0.96
NCL-206ENST00000454824 RREB1Q92766 1687 aa9.03□□□□□ -0.96
NCL-206ENST00000454824 GNPATO15228 680 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 STARD3NLO95772 234 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 ITPK1Q13572 414 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 ZNF790Q6PG37 636 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 LINC00116Q8NCU8 138 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 ARXQ96QS3 562 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 THUMPD2Q9BTF0 503 aaKnown RBP9.02□□□□□ -0.97
NCL-206ENST00000454824 TEX13AQ9BXU3 409 aaPredicted RBP9.02□□□□□ -0.97
NCL-206ENST00000454824 MIS18AQ9NYP9 233 aa9.02□□□□□ -0.97
NCL-206ENST00000454824 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.97
NCL-206ENST00000454824 VIRMAQ69YN4 1812 aaKnown RBP9.01□□□□□ -0.97
NCL-206ENST00000454824 APAF1O14727 1248 aa9.01□□□□□ -0.97
NCL-206ENST00000454824 LY75O60449 1722 aa9.01□□□□□ -0.97
NCL-206ENST00000454824 TRAPPC3LQ5T215 181 aa9.01□□□□□ -0.97
NCL-206ENST00000454824 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms