RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 EYA1Q99502 592 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
SYVN1-204ENST00000449943 FLIIQ13045 1269 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 TMEM2Q9UHN6 1383 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 LTKP29376 864 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
SYVN1-204ENST00000449943 TECPR2O15040 1411 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 PLEKHG3A1L390 1219 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 MX1P20591 662 aa13.82□□□□□ -0.2
SYVN1-204ENST00000449943 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 NRKQ7Z2Y5 1582 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
SYVN1-204ENST00000449943 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
SYVN1-204ENST00000449943 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
SYVN1-204ENST00000449943 MCCP23508 829 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 CEBPAP49715 358 aaPredicted RBP13.8□□□□□ -0.2
SYVN1-204ENST00000449943 ESYT1Q9BSJ8 1104 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 DIP2BQ9P265 1576 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
SYVN1-204ENST00000449943 NLRP6P59044 892 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
SYVN1-204ENST00000449943 ARHGEF10O15013 1369 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
SYVN1-204ENST00000449943 RBSNQ9H1K0 784 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
SYVN1-204ENST00000449943 GNAI3P08754 354 aa13.79□□□□□ -0.2
SYVN1-204ENST00000449943 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
SYVN1-204ENST00000449943 FLT4P35916 1363 aa13.79□□□□□ -0.2
SYVN1-204ENST00000449943 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
SYVN1-204ENST00000449943 SYCE3A1L190 88 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 OSBPL3Q9H4L5 887 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 ZNF445P59923 1031 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
SYVN1-204ENST00000449943 ADAMTS13Q76LX8 1427 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 UNC5CLQ8IV45 518 aa13.78□□□□□ -0.2
SYVN1-204ENST00000449943 GNAT3A8MTJ3 354 aa13.77□□□□□ -0.2
SYVN1-204ENST00000449943 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 SBNO1A3KN83 1393 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
SYVN1-204ENST00000449943 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
SYVN1-204ENST00000449943 CHMLP26374 656 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
SYVN1-204ENST00000449943 ZSCAN30Q86W11 494 aa13.76□□□□□ -0.21
SYVN1-204ENST00000449943 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
SYVN1-204ENST00000449943 OS9Q13438 667 aaPredicted RBP13.76□□□□□ -0.21
SYVN1-204ENST00000449943 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
SYVN1-204ENST00000449943 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
SYVN1-204ENST00000449943 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
SYVN1-204ENST00000449943 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
SYVN1-204ENST00000449943 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
SYVN1-204ENST00000449943 HDGFL1Q5TGJ6 251 aa13.75□□□□□ -0.21
SYVN1-204ENST00000449943 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
SYVN1-204ENST00000449943 TTC21AQ8NDW8 1320 aa13.75□□□□□ -0.21
SYVN1-204ENST00000449943 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
SYVN1-204ENST00000449943 IL17REQ8NFR9 667 aa13.74□□□□□ -0.21
SYVN1-204ENST00000449943 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
SYVN1-204ENST00000449943 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
SYVN1-204ENST00000449943 IL25Q9H293 177 aa13.74□□□□□ -0.21
SYVN1-204ENST00000449943 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
SYVN1-204ENST00000449943 HSP90AA2PQ14568 343 aaPredicted RBP13.73□□□□□ -0.21
SYVN1-204ENST00000449943 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
SYVN1-204ENST00000449943 MCM2P49736 904 aa13.73□□□□□ -0.21
SYVN1-204ENST00000449943 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
SYVN1-204ENST00000449943 HOXC9P31274 260 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 UBE2Q2Q8WVN8 375 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 PSME1Q06323 249 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
SYVN1-204ENST00000449943 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 KDRP35968 1356 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 PLEKHG1Q9ULL1 1385 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
SYVN1-204ENST00000449943 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
SYVN1-204ENST00000449943 BRD1O95696 1058 aa13.71□□□□□ -0.21
SYVN1-204ENST00000449943 ANXA1P04083 346 aa13.71□□□□□ -0.21
SYVN1-204ENST00000449943 RGPD1P0DJD0 1748 aa13.71□□□□□ -0.21
SYVN1-204ENST00000449943 DTNBO60941 627 aa13.71□□□□□ -0.22
SYVN1-204ENST00000449943 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.22
SYVN1-204ENST00000449943 MAP3K5Q99683 1374 aa13.71□□□□□ -0.22
SYVN1-204ENST00000449943 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.22
SYVN1-204ENST00000449943 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
SYVN1-204ENST00000449943 MBD3O95983 291 aa13.7□□□□□ -0.22
SYVN1-204ENST00000449943 SOS1Q07889 1333 aaPredicted RBP13.7□□□□□ -0.22
SYVN1-204ENST00000449943 ANAPC15P60006 121 aa13.69□□□□□ -0.22
SYVN1-204ENST00000449943 XPCQ01831 940 aaPredicted RBP13.69□□□□□ -0.22
SYVN1-204ENST00000449943 STAP2Q9UGK3 403 aa13.69□□□□□ -0.22
SYVN1-204ENST00000449943 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
SYVN1-204ENST00000449943 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms