RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TNRQ92752 1358 aa15.78■□□□□ 0.12
SHC1-210ENST00000448116 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.12
SHC1-210ENST00000448116 FLIIQ13045 1269 aa15.77■□□□□ 0.12
SHC1-210ENST00000448116 LRRCC1Q9C099 1032 aa15.77■□□□□ 0.12
SHC1-210ENST00000448116 LMBRD1Q9NUN5 540 aa15.77■□□□□ 0.12
SHC1-210ENST00000448116 TPRNQ4KMQ1 711 aa15.77■□□□□ 0.12
SHC1-210ENST00000448116 IL1RAPL2Q9NP60 686 aa15.77■□□□□ 0.11
SHC1-210ENST00000448116 SPATA31D1Q6ZQQ2 1576 aa15.77■□□□□ 0.11
SHC1-210ENST00000448116 CRB1P82279 1406 aa15.76■□□□□ 0.11
SHC1-210ENST00000448116 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
SHC1-210ENST00000448116 AMOTL2Q9Y2J4 779 aa15.76■□□□□ 0.11
SHC1-210ENST00000448116 LRRFIP2Q9Y608 721 aaKnown RBP15.76■□□□□ 0.11
SHC1-210ENST00000448116 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 MX1P20591 662 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 CCDC30Q5VVM6 783 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 CCDC173Q0VFZ6 552 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 CLEC17AQ6ZS10 378 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 TMX3Q96JJ7 454 aa15.75■□□□□ 0.11
SHC1-210ENST00000448116 USP6P35125 1406 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 MAP4K4O95819 1239 aaPredicted RBP15.74■□□□□ 0.11
SHC1-210ENST00000448116 GNAI3P08754 354 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
SHC1-210ENST00000448116 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 MCCP23508 829 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 CYP2E1P05181 493 aaPredicted RBP15.74■□□□□ 0.11
SHC1-210ENST00000448116 EIF2S2P20042 333 aaKnown RBP15.74■□□□□ 0.11
SHC1-210ENST00000448116 ESYT1Q9BSJ8 1104 aa15.74■□□□□ 0.11
SHC1-210ENST00000448116 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 EID1Q9Y6B2 187 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 PRIM1P49642 420 aaKnown RBP15.73■□□□□ 0.11
SHC1-210ENST00000448116 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 OVOS2A0A0J9YW53 1432 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 OVOS2Q6IE36 1432 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 NRXN3Q9Y4C0 1643 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 GNAT3A8MTJ3 354 aa15.73■□□□□ 0.11
SHC1-210ENST00000448116 AGLP35573 1532 aa15.72■□□□□ 0.11
SHC1-210ENST00000448116 RBSNQ9H1K0 784 aa15.72■□□□□ 0.11
SHC1-210ENST00000448116 SETD1AO15047 1707 aaKnown RBP15.72■□□□□ 0.11
SHC1-210ENST00000448116 ATP8B2P98198 1209 aa15.72■□□□□ 0.11
SHC1-210ENST00000448116 GPT2Q8TD30 523 aa15.72■□□□□ 0.11
SHC1-210ENST00000448116 OSBPL3Q9H4L5 887 aa15.72■□□□□ 0.11
SHC1-210ENST00000448116 UBTFL1P0CB47 393 aaPredicted RBP15.71■□□□□ 0.11
SHC1-210ENST00000448116 UNC5CLQ8IV45 518 aa15.71■□□□□ 0.11
SHC1-210ENST00000448116 TECPR2O15040 1411 aa15.71■□□□□ 0.11
SHC1-210ENST00000448116 FLT4P35916 1363 aa15.71■□□□□ 0.11
SHC1-210ENST00000448116 SYCE3A1L190 88 aa15.71■□□□□ 0.11
SHC1-210ENST00000448116 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.11
SHC1-210ENST00000448116 RNF214Q8ND24 703 aa15.71■□□□□ 0.11
SHC1-210ENST00000448116 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
SHC1-210ENST00000448116 CHMLP26374 656 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
SHC1-210ENST00000448116 REREQ9P2R6 1566 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
SHC1-210ENST00000448116 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 ZNF445P59923 1031 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
SHC1-210ENST00000448116 C3P01024 1663 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 ADAMTS13Q76LX8 1427 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 ABTB2Q8N961 1025 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 PPP1R9BQ96SB3 815 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 GDPD2Q9HCC8 539 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 TMEM63CQ9P1W3 806 aa15.69■□□□□ 0.1
SHC1-210ENST00000448116 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
SHC1-210ENST00000448116 LARP6Q9BRS8 491 aaKnown RBP15.68■□□□□ 0.1
SHC1-210ENST00000448116 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
SHC1-210ENST00000448116 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
SHC1-210ENST00000448116 TAF7Q15545 349 aaPredicted RBP15.68■□□□□ 0.1
SHC1-210ENST00000448116 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
SHC1-210ENST00000448116 USP31Q70CQ4 1352 aa15.68■□□□□ 0.1
SHC1-210ENST00000448116 NAP1L2Q9ULW6 460 aaPredicted RBP15.67■□□□□ 0.1
SHC1-210ENST00000448116 IGSF1Q8N6C5 1336 aa15.67■□□□□ 0.1
SHC1-210ENST00000448116 ANXA1P04083 346 aa15.66■□□□□ 0.1
SHC1-210ENST00000448116 PPP1R42Q7Z4L9 355 aa15.66■□□□□ 0.1
SHC1-210ENST00000448116 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
SHC1-210ENST00000448116 HOXC9P31274 260 aa15.66■□□□□ 0.1
SHC1-210ENST00000448116 MCM2P49736 904 aa15.66■□□□□ 0.1
SHC1-210ENST00000448116 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
SHC1-210ENST00000448116 SRGAP3O43295 1099 aa15.65■□□□□ 0.1
SHC1-210ENST00000448116 IL25Q9H293 177 aa15.65■□□□□ 0.1
SHC1-210ENST00000448116 IBTKQ9P2D0 1353 aaPredicted RBP15.65■□□□□ 0.1
SHC1-210ENST00000448116 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
SHC1-210ENST00000448116 DTNBO60941 627 aa15.64■□□□□ 0.1
SHC1-210ENST00000448116 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.1
SHC1-210ENST00000448116 HSP90AA2PQ14568 343 aaPredicted RBP15.64■□□□□ 0.09
SHC1-210ENST00000448116 SRCIN1Q9C0H9 1055 aa15.64■□□□□ 0.09
SHC1-210ENST00000448116 SALL3Q9BXA9 1300 aa15.64■□□□□ 0.09
SHC1-210ENST00000448116 RIMS1Q86UR5 1692 aaKnown RBP15.64■□□□□ 0.09
SHC1-210ENST00000448116 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
SHC1-210ENST00000448116 AKAP12Q02952 1782 aa15.64■□□□□ 0.09
SHC1-210ENST00000448116 CEP170BQ9Y4F5 1589 aaPredicted RBP15.64■□□□□ 0.09
SHC1-210ENST00000448116 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
SHC1-210ENST00000448116 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
SHC1-210ENST00000448116 BRD1O95696 1058 aa15.63■□□□□ 0.09
SHC1-210ENST00000448116 NRKQ7Z2Y5 1582 aa15.63■□□□□ 0.09
SHC1-210ENST00000448116 HTATSF1O43719 755 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms