RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
CTDSPL-206ENST00000443503 COL17A1Q9UMD9 1497 aaPredicted RBP26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 GNL3LQ9NVN8 582 aaKnown RBP26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 ADGRL2O95490 1459 aa26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 CCDC192P0DO97 292 aa26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 EIF4A2Q14240 407 aaKnown RBP26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 KRT28Q7Z3Y7 464 aa26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 CCDC83Q8IWF9 413 aa26.61■■□□□ 1.85
CTDSPL-206ENST00000443503 NACAP1Q9BZK3 213 aa26.6■■□□□ 1.85
CTDSPL-206ENST00000443503 RIMS2Q9UQ26 1411 aa26.6■■□□□ 1.85
CTDSPL-206ENST00000443503 TNMDQ9H2S6 317 aa26.6■■□□□ 1.85
CTDSPL-206ENST00000443503 PHACTR3Q96KR7 559 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 BCL11BQ9C0K0 894 aaPredicted RBP26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 IDH1O75874 414 aaKnown RBP26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 SSFA2P28290 1259 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 NUCB1Q02818 461 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 PPP1R42Q7Z4L9 355 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 SPC24Q8NBT2 197 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 DDX11Q96FC9 970 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 HYPKQ9NX55 129 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 STARD3NLO95772 234 aa26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 SAMD1Q6SPF0 538 aaPredicted RBP26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
CTDSPL-206ENST00000443503 CTNNA3Q9UI47 895 aa26.58■■□□□ 1.85
CTDSPL-206ENST00000443503 TSPYL6Q8N831 410 aa26.58■■□□□ 1.85
CTDSPL-206ENST00000443503 A0A1W2PP64 1363 aa26.58■■□□□ 1.85
CTDSPL-206ENST00000443503 ZSCAN25Q6NSZ9 544 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 SPATA32Q96LK8 384 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 A0A087WZG4 1122 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 MAGI3Q5TCQ9 1506 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 NCKAP5LQ9HCH0 1330 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 A0A0U1RQG5 324 aaPredicted RBP26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 MAP3K2Q9Y2U5 619 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
CTDSPL-206ENST00000443503 MRPL50Q8N5N7 158 aaKnown RBP26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 TNPO1Q92973 898 aaKnown RBP26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 NCBP3Q53F19 620 aaKnown RBP26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 CEP89Q96ST8 783 aa26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 TTC22Q5TAA0 569 aa26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 TMOD3Q9NYL9 352 aa26.56■■□□□ 1.84
CTDSPL-206ENST00000443503 METTL24Q5JXM2 366 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 PDILTQ8N807 584 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 JMYQ8N9B5 988 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 TTC21AQ8NDW8 1320 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 SMC2O95347 1197 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 TRIM22Q8IYM9 498 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 SAMD9Q5K651 1589 aa26.55■■□□□ 1.84
CTDSPL-206ENST00000443503 ANKRD24Q8TF21 1146 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 SYCE3A1L190 88 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 VAMP4O75379 141 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 KRT24Q2M2I5 525 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 ECHDC1Q9NTX5 307 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 C8orf34Q49A92 452 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 PIK3R4Q99570 1358 aa26.54■■□□□ 1.84
CTDSPL-206ENST00000443503 LARP6Q9BRS8 491 aaKnown RBP26.53■■□□□ 1.84
CTDSPL-206ENST00000443503 NUP133Q8WUM0 1156 aa26.53■■□□□ 1.84
CTDSPL-206ENST00000443503 SLC3A2P08195 630 aaKnown RBP26.53■■□□□ 1.84
CTDSPL-206ENST00000443503 CHRNA2Q15822 529 aa26.53■■□□□ 1.84
CTDSPL-206ENST00000443503 IFIT1P09914 478 aaKnown RBP26.52■■□□□ 1.84
CTDSPL-206ENST00000443503 ANKRD44Q8N8A2 993 aa26.52■■□□□ 1.84
CTDSPL-206ENST00000443503 ZBTB3Q9H5J0 574 aa26.52■■□□□ 1.84
CTDSPL-206ENST00000443503 TDO2P48775 406 aa26.51■■□□□ 1.84
CTDSPL-206ENST00000443503 ATP5J2-PTCD1G3V325 749 aa26.51■■□□□ 1.83
CTDSPL-206ENST00000443503 TCEAL9Q9UHQ7 104 aa26.51■■□□□ 1.83
CTDSPL-206ENST00000443503 CCDC69A6NI79 296 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 ESPNB1AK53 854 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 SDSP20132 328 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 IFNL2Q8IZJ0 200 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 CFAP45Q9UL16 551 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 CTDP1Q9Y5B0 961 aaPredicted RBP26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 UBE3BQ7Z3V4 1068 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 NUP62CLQ9H1M0 184 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 LRP2BPQ9P2M1 347 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 BICDL1Q6ZP65 573 aa26.5■■□□□ 1.83
CTDSPL-206ENST00000443503 MTHFSDQ2M296 383 aaKnown RBP26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 ABCF2Q9UG63 623 aa26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 U3KPZ7 1027 aaPredicted RBP26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 IMMTQ16891 758 aaKnown RBP26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 MNS1Q8NEH6 495 aa26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 NPATQ14207 1427 aa26.49■■□□□ 1.83
CTDSPL-206ENST00000443503 CHPF2Q9P2E5 772 aa26.48■■□□□ 1.83
CTDSPL-206ENST00000443503 VSIG10Q8N0Z9 540 aa26.48■■□□□ 1.83
CTDSPL-206ENST00000443503 RAI14Q9P0K7 980 aa26.48■■□□□ 1.83
CTDSPL-206ENST00000443503 LIMCH1Q9UPQ0 1083 aa26.48■■□□□ 1.83
CTDSPL-206ENST00000443503 RHPN1Q8TCX5 695 aa26.47■■□□□ 1.83
CTDSPL-206ENST00000443503 JARID2Q92833 1246 aaPredicted RBP26.47■■□□□ 1.83
CTDSPL-206ENST00000443503 AKAP2Q9Y2D5 859 aa26.47■■□□□ 1.83
CTDSPL-206ENST00000443503 AIDAQ96BJ3 306 aa26.47■■□□□ 1.83
CTDSPL-206ENST00000443503 DMRT2Q9Y5R5 561 aa26.47■■□□□ 1.83
CTDSPL-206ENST00000443503 C16orf71Q8IYS4 520 aaPredicted RBP26.46■■□□□ 1.83
CTDSPL-206ENST00000443503 IGHMBP2P38935 993 aaKnown RBP26.46■■□□□ 1.83
CTDSPL-206ENST00000443503 IFIT5Q13325 482 aaKnown RBP26.46■■□□□ 1.83
CTDSPL-206ENST00000443503 IKQ13123 557 aaPredicted RBP26.46■■□□□ 1.83
CTDSPL-206ENST00000443503 ZBTB40Q9NUA8 1239 aa26.46■■□□□ 1.83
CTDSPL-206ENST00000443503 YTHDC2Q9H6S0 1430 aaKnown RBP26.45■■□□□ 1.83
CTDSPL-206ENST00000443503 NPC1L1Q9UHC9 1359 aa26.45■■□□□ 1.83
CTDSPL-206ENST00000443503 PDE1AP54750 535 aa26.45■■□□□ 1.82
CTDSPL-206ENST00000443503 UBAC1Q9BSL1 405 aa26.45■■□□□ 1.82
CTDSPL-206ENST00000443503 SH2B1Q9NRF2 756 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms