RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
EPHA4-206ENST00000424339 SPDYE16A6NNV3 312 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-206ENST00000424339 MYT1Q01538 1121 aa9.66□□□□□ -0.86
EPHA4-206ENST00000424339 PSME1Q06323 249 aa9.66□□□□□ -0.86
EPHA4-206ENST00000424339 NGDNQ8NEJ9 315 aaKnown RBP9.66□□□□□ -0.86
EPHA4-206ENST00000424339 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
EPHA4-206ENST00000424339 NHSL1Q5SYE7 1610 aa9.66□□□□□ -0.86
EPHA4-206ENST00000424339 AKAP12Q02952 1782 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 ZPR1O75312 459 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 SLC4A3P48751 1232 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-206ENST00000424339 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
EPHA4-206ENST00000424339 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.87
EPHA4-206ENST00000424339 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.87
EPHA4-206ENST00000424339 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
EPHA4-206ENST00000424339 ACEP12821 1306 aa9.64□□□□□ -0.87
EPHA4-206ENST00000424339 POTECB2RU33 542 aa9.64□□□□□ -0.87
EPHA4-206ENST00000424339 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-206ENST00000424339 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
EPHA4-206ENST00000424339 USP6P35125 1406 aa9.64□□□□□ -0.87
EPHA4-206ENST00000424339 KTN1Q86UP2 1357 aaKnown RBP9.63□□□□□ -0.87
EPHA4-206ENST00000424339 SOS2Q07890 1332 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-206ENST00000424339 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 PDIA6Q15084 440 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 SLC12A5Q9H2X9 1139 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
EPHA4-206ENST00000424339 PXDNQ92626 1479 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 FOXO3O43524 673 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 PMFBP1Q8TBY8 1022 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 NRKQ7Z2Y5 1582 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 PHLPP1O60346 1717 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 NSD2O96028 1365 aa9.62□□□□□ -0.87
EPHA4-206ENST00000424339 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
EPHA4-206ENST00000424339 SWT1Q5T5J6 900 aaKnown RBP9.61□□□□□ -0.87
EPHA4-206ENST00000424339 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
EPHA4-206ENST00000424339 LRRC59Q96AG4 307 aaKnown RBP9.61□□□□□ -0.87
EPHA4-206ENST00000424339 SSH2Q76I76 1423 aa9.61□□□□□ -0.87
EPHA4-206ENST00000424339 TRPM3Q9HCF6 1732 aaPredicted RBP9.61□□□□□ -0.87
EPHA4-206ENST00000424339 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
EPHA4-206ENST00000424339 CGNL1Q0VF96 1302 aa9.6□□□□□ -0.87
EPHA4-206ENST00000424339 TNS3Q68CZ2 1445 aa9.6□□□□□ -0.87
EPHA4-206ENST00000424339 SPRYD7Q5W111 196 aa9.6□□□□□ -0.87
EPHA4-206ENST00000424339 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
EPHA4-206ENST00000424339 PANK3Q9H999 370 aa9.6□□□□□ -0.87
EPHA4-206ENST00000424339 KNSTRNQ9Y448 316 aa9.6□□□□□ -0.87
EPHA4-206ENST00000424339 COL16A1Q07092 1604 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-206ENST00000424339 SPATA31A3Q5VYP0 1347 aa9.59□□□□□ -0.87
EPHA4-206ENST00000424339 ALS2Q96Q42 1657 aa9.59□□□□□ -0.87
EPHA4-206ENST00000424339 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
EPHA4-206ENST00000424339 PRR14Q9BWN1 585 aa9.59□□□□□ -0.87
EPHA4-206ENST00000424339 TTC21BQ7Z4L5 1316 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 USP54Q70EL1 1684 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 NSD3Q9BZ95 1437 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 FAM187AA6NFU0 413 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PRR20EP86478 221 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PRR20CP86479 221 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PRR20DP86480 221 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PRR20BP86481 221 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PRR20AP86496 221 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 NLRP13Q86W25 1043 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 USP31Q70CQ4 1352 aa9.58□□□□□ -0.88
EPHA4-206ENST00000424339 MED1Q15648 1581 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-206ENST00000424339 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
EPHA4-206ENST00000424339 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-206ENST00000424339 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-206ENST00000424339 PRIM1P49642 420 aaKnown RBP9.57□□□□□ -0.88
EPHA4-206ENST00000424339 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
EPHA4-206ENST00000424339 JCADQ9P266 1359 aa9.57□□□□□ -0.88
EPHA4-206ENST00000424339 SHPRHQ149N8 1683 aa9.57□□□□□ -0.88
EPHA4-206ENST00000424339 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-206ENST00000424339 PIK3C2AO00443 1686 aa9.56□□□□□ -0.88
EPHA4-206ENST00000424339 ABTB2Q8N961 1025 aa9.56□□□□□ -0.88
EPHA4-206ENST00000424339 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
EPHA4-206ENST00000424339 ANKRD26Q9UPS8 1709 aa9.56□□□□□ -0.88
EPHA4-206ENST00000424339 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
EPHA4-206ENST00000424339 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 COG3Q96JB2 828 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 OVOS2A0A0J9YW53 1432 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 OVOS2Q6IE36 1432 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 USP19O94966 1318 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
EPHA4-206ENST00000424339 PNPLA6Q8IY17 1366 aa9.54□□□□□ -0.88
EPHA4-206ENST00000424339 FYB1O15117 783 aa9.54□□□□□ -0.88
EPHA4-206ENST00000424339 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-206ENST00000424339 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
EPHA4-206ENST00000424339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.54□□□□□ -0.88
EPHA4-206ENST00000424339 ANKLE1Q8NAG6 615 aa9.54□□□□□ -0.88
EPHA4-206ENST00000424339 DDX17Q92841 729 aaKnown RBP9.54□□□□□ -0.88
EPHA4-206ENST00000424339 EMID1Q96A84 441 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-206ENST00000424339 SLIT3O75094 1523 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms