RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 TIGD1Q96MW7 591 aa9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 C3P01024 1663 aa9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 LRRC7Q96NW7 1537 aa9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 API5Q9BZZ5 524 aaKnown RBP9.65□□□□□ -0.86
HMGXB4-202ENST00000418170 RGS12O14924 1447 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 KIF3BO15066 747 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 UBE2HP62256 183 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 DNAJC2Q99543 621 aaKnown RBP9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 CDC42BPGQ6DT37 1551 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 ANAPC15P60006 121 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 KRT222Q8N1A0 295 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 TULP4Q9NRJ4 1543 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 SPC24Q8NBT2 197 aa9.64□□□□□ -0.87
HMGXB4-202ENST00000418170 TUBGCP6Q96RT7 1819 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 FAM193AP78312 1265 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 TAF7LQ5H9L4 462 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 PAXBP1Q9Y5B6 917 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 TULP2O00295 520 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 RPAP2Q8IXW5 612 aaPredicted RBP9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 FAM135BQ49AJ0 1406 aa9.63□□□□□ -0.87
HMGXB4-202ENST00000418170 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 MCCP23508 829 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 FAM53CQ9NYF3 392 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 PNPLA6Q8IY17 1366 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 FCHSD2O94868 740 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 PTGS1P23219 599 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 OSBPL3Q9H4L5 887 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 EVC2Q86UK5 1308 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 GIMAP6Q6P9H5 292 aa9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 C16orf45Q96MC5 204 aaPredicted RBP9.62□□□□□ -0.87
HMGXB4-202ENST00000418170 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 CEP85Q6P2H3 762 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 NOL8Q76FK4 1167 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 CREBRFQ8IUR6 639 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 CCDC112Q8NEF3 446 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 C14orf93Q9H972 538 aaKnown RBP9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 GNAI1P63096 354 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 IFT57Q9NWB7 429 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 TNNT1P13805 278 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 TWISTNBQ3B726 338 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 ZNF397Q8NF99 534 aaPredicted RBP9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 ZFYVE9O95405 1425 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
HMGXB4-202ENST00000418170 ELL2O00472 640 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 ZNF853P0CG23 659 aa9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 ZSCAN22P10073 491 aaPredicted RBP9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 CAPN2P17655 700 aa9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 MBIPQ9NS73 344 aa9.6□□□□□ -0.87
HMGXB4-202ENST00000418170 CCDC192P0DO97 292 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 PRKAR2BP31323 418 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 PDE1AP54750 535 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 APBB1O00213 710 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 THUMPD2Q9BTF0 503 aaKnown RBP9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 ALKQ9UM73 1620 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 LRMPQ12912 555 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 CCDC186Q7Z3E2 898 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 UPF3BQ9BZI7 483 aaKnown RBP9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 TSPYL1Q9H0U9 437 aa9.59□□□□□ -0.87
HMGXB4-202ENST00000418170 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 ATP6V1DQ9Y5K8 247 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 FIBPO43427 364 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 TMEM132EQ6IEE7 984 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 C8orf58Q8NAV2 365 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 FER1L4A9Z1Z3 1794 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 A2ML1A8K2U0 1454 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 ZSCAN25Q6NSZ9 544 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 FYB1O15117 783 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 STX6O43752 255 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 F13A1P00488 732 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
HMGXB4-202ENST00000418170 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 CABP2Q9NPB3 220 aa9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 CD163L1Q9NR16 1453 aa9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 DLG5Q8TDM6 1919 aa9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 SYT1P21579 422 aa9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 CEP135Q66GS9 1140 aa9.57□□□□□ -0.88
HMGXB4-202ENST00000418170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms