RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 RREB1Q92766 1687 aa23.16■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 ASAP1Q9ULH1 1129 aa23.14■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 LY75O60449 1722 aa23.13■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 RIPK4P57078 832 aa23.12■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 TEFQ10587 303 aa23.12■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 LRRC4BQ9NT99 713 aa23.11■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 MCM10Q7L590 875 aa23.1■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 VIRMAQ69YN4 1812 aaKnown RBP23.1■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 SIK1P57059 783 aa23.09■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
COMMD3-BMI1-201ENST00000417470 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 DCTN1Q14203 1278 aa23.07■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 APAF1O14727 1248 aa23.06■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 TRIM35Q9UPQ4 493 aa23.05■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 PAPPAQ13219 1627 aa23.04■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 ZNF790Q6PG37 636 aa23.04■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 SLC4A9Q96Q91 983 aa23.04■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 SLC39A6Q13433 755 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 MIER1Q8N108 512 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 AKT1S1Q96B36 256 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 RRP7AQ9Y3A4 280 aaKnown RBP23.03■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 NEUROD2Q15784 382 aa23.02■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 FAM9BQ8IZU0 186 aa23.02■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 ANO8Q9HCE9 1232 aaPredicted RBP23.02■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 STK32BQ9NY57 414 aa23.02■■□□□ 1.28
COMMD3-BMI1-201ENST00000417470 KCNQ4P56696 695 aa23.01■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 CCDC27Q2M243 656 aa23.01■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 RBM42Q9BTD8 480 aaKnown RBP23.01■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 PTCD1O75127 700 aaKnown RBP23■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 KCPQ6ZWJ8 1503 aa22.99■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 ITPK1Q13572 414 aa22.99■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 CICQ96RK0 1608 aaPredicted RBP22.98■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 UBR2Q8IWV8 1755 aa22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 R3HDM1Q15032 1099 aaKnown RBP22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 ZNF827Q17R98 1081 aa22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 RC3H1Q5TC82 1133 aaKnown RBP22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 ZNF496Q96IT1 587 aaPredicted RBP22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 FMNL2Q96PY5 1086 aa22.97■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 TAF1LQ8IZX4 1826 aa22.96■■□□□ 1.27
COMMD3-BMI1-201ENST00000417470 KCNQ3O43525 872 aa22.95■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 C5P01031 1676 aa22.95■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 CALD1Q05682 793 aaKnown RBP22.95■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 TEX13AQ9BXU3 409 aaPredicted RBP22.95■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 HEG1Q9ULI3 1381 aa22.95■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 CNTNAP4Q9C0A0 1308 aa22.94■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 CHL1O00533 1208 aa22.94■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 PSDA5PKW4 1024 aaPredicted RBP22.92■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 FLAD1Q8NFF5 587 aa22.92■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 TFCP2L1Q9NZI6 479 aa22.92■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 ZNF853P0CG23 659 aa22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 EIF4A1P60842 406 aaKnown RBP22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 AK7Q96M32 723 aa22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 IFT57Q9NWB7 429 aa22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 COL5A3P25940 1745 aaPredicted RBP22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 TJP1Q07157 1748 aa22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 QSER1Q2KHR3 1735 aa22.9■■□□□ 1.26
COMMD3-BMI1-201ENST00000417470 STARD3NLO95772 234 aa22.89■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 SSFA2P28290 1259 aa22.89■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 IL16Q14005 1332 aa22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 PNPLA7Q6ZV29 1317 aa22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 CRKLP46109 303 aaKnown RBP22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 GNAI1P63096 354 aa22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 WDR63Q8IWG1 891 aa22.88■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 SLC16A10Q8TF71 515 aa22.87■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 GIGYF1O75420 1035 aaPredicted RBP22.86■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 ADRA2BP18089 450 aa22.86■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 CCDC87Q9NVE4 849 aa22.86■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 RTCBQ9Y3I0 505 aaKnown RBP22.86■■□□□ 1.25
COMMD3-BMI1-201ENST00000417470 GNPATO15228 680 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms