RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
LINC00398-201ENST00000414407 HMGB2P26583 209 aaKnown RBP21.74■■□□□ 1.07
LINC00398-201ENST00000414407 ATG3Q9NT62 314 aa21.74■■□□□ 1.07
LINC00398-201ENST00000414407 RREB1Q92766 1687 aa21.74■■□□□ 1.07
LINC00398-201ENST00000414407 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
LINC00398-201ENST00000414407 TEFQ10587 303 aa21.73■■□□□ 1.07
LINC00398-201ENST00000414407 ASAP1Q9ULH1 1129 aa21.73■■□□□ 1.07
LINC00398-201ENST00000414407 RIPK4P57078 832 aa21.72■■□□□ 1.07
LINC00398-201ENST00000414407 LY75O60449 1722 aa21.72■■□□□ 1.07
LINC00398-201ENST00000414407 MCM10Q7L590 875 aa21.71■■□□□ 1.07
LINC00398-201ENST00000414407 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
LINC00398-201ENST00000414407 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
LINC00398-201ENST00000414407 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
LINC00398-201ENST00000414407 LRRC4BQ9NT99 713 aa21.69■■□□□ 1.06
LINC00398-201ENST00000414407 CCNL1Q9UK58 526 aaPredicted RBP21.69■■□□□ 1.06
LINC00398-201ENST00000414407 NUP188Q5SRE5 1749 aa21.69■■□□□ 1.06
LINC00398-201ENST00000414407 LOC102724428A0A0B4J2F2 783 aa21.68■■□□□ 1.06
LINC00398-201ENST00000414407 APAF1O14727 1248 aa21.68■■□□□ 1.06
LINC00398-201ENST00000414407 SIK1P57059 783 aa21.68■■□□□ 1.06
LINC00398-201ENST00000414407 DCTN1Q14203 1278 aa21.68■■□□□ 1.06
LINC00398-201ENST00000414407 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
LINC00398-201ENST00000414407 MIER1Q8N108 512 aa21.67■■□□□ 1.06
LINC00398-201ENST00000414407 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
LINC00398-201ENST00000414407 FAM9BQ8IZU0 186 aa21.66■■□□□ 1.06
LINC00398-201ENST00000414407 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
LINC00398-201ENST00000414407 SIPA1L3O60292 1781 aaPredicted RBP21.66■■□□□ 1.06
LINC00398-201ENST00000414407 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
LINC00398-201ENST00000414407 TRIM35Q9UPQ4 493 aa21.65■■□□□ 1.06
LINC00398-201ENST00000414407 ZNF831Q5JPB2 1677 aa21.65■■□□□ 1.06
LINC00398-201ENST00000414407 PAPPAQ13219 1627 aa21.65■■□□□ 1.06
LINC00398-201ENST00000414407 BTBD11A6QL63 1104 aa21.64■■□□□ 1.05
LINC00398-201ENST00000414407 ZNF790Q6PG37 636 aa21.64■■□□□ 1.05
LINC00398-201ENST00000414407 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
LINC00398-201ENST00000414407 TTC5Q8N0Z6 440 aa21.63■■□□□ 1.05
LINC00398-201ENST00000414407 RBM42Q9BTD8 480 aaKnown RBP21.63■■□□□ 1.05
LINC00398-201ENST00000414407 PTCD1O75127 700 aaKnown RBP21.62■■□□□ 1.05
LINC00398-201ENST00000414407 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
LINC00398-201ENST00000414407 KCNQ4P56696 695 aa21.62■■□□□ 1.05
LINC00398-201ENST00000414407 VSIG10Q8N0Z9 540 aa21.62■■□□□ 1.05
LINC00398-201ENST00000414407 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
LINC00398-201ENST00000414407 BABAM1Q9NWV8 329 aa21.62■■□□□ 1.05
LINC00398-201ENST00000414407 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
LINC00398-201ENST00000414407 SLC4A9Q96Q91 983 aa21.61■■□□□ 1.05
LINC00398-201ENST00000414407 ANO8Q9HCE9 1232 aaPredicted RBP21.61■■□□□ 1.05
LINC00398-201ENST00000414407 STK32BQ9NY57 414 aa21.61■■□□□ 1.05
LINC00398-201ENST00000414407 KCPQ6ZWJ8 1503 aa21.6■■□□□ 1.05
LINC00398-201ENST00000414407 SLC15A2Q16348 729 aa21.6■■□□□ 1.05
LINC00398-201ENST00000414407 NGEFQ8N5V2 710 aa21.6■■□□□ 1.05
LINC00398-201ENST00000414407 AKT1S1Q96B36 256 aa21.6■■□□□ 1.05
LINC00398-201ENST00000414407 ITPK1Q13572 414 aa21.59■■□□□ 1.05
LINC00398-201ENST00000414407 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
LINC00398-201ENST00000414407 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.05
LINC00398-201ENST00000414407 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.05
LINC00398-201ENST00000414407 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
LINC00398-201ENST00000414407 C5P01031 1676 aa21.57■■□□□ 1.04
LINC00398-201ENST00000414407 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
LINC00398-201ENST00000414407 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
LINC00398-201ENST00000414407 R3HDM1Q15032 1099 aaKnown RBP21.56■■□□□ 1.04
LINC00398-201ENST00000414407 ZNF827Q17R98 1081 aa21.56■■□□□ 1.04
LINC00398-201ENST00000414407 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
LINC00398-201ENST00000414407 HEG1Q9ULI3 1381 aa21.56■■□□□ 1.04
LINC00398-201ENST00000414407 KCNQ3O43525 872 aa21.55■■□□□ 1.04
LINC00398-201ENST00000414407 RC3H1Q5TC82 1133 aaKnown RBP21.55■■□□□ 1.04
LINC00398-201ENST00000414407 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
LINC00398-201ENST00000414407 CHL1O00533 1208 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 MIS18AQ9NYP9 233 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 C4BP0C0L5 1744 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 CNTNAP4Q9C0A0 1308 aa21.54■■□□□ 1.04
LINC00398-201ENST00000414407 AK7Q96M32 723 aa21.53■■□□□ 1.04
LINC00398-201ENST00000414407 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
LINC00398-201ENST00000414407 TSPYL4Q9UJ04 414 aa21.53■■□□□ 1.04
LINC00398-201ENST00000414407 KDM3BQ7LBC6 1761 aa21.52■■□□□ 1.04
LINC00398-201ENST00000414407 PSDA5PKW4 1024 aaPredicted RBP21.52■■□□□ 1.04
LINC00398-201ENST00000414407 DNAJC10Q8IXB1 793 aa21.52■■□□□ 1.04
LINC00398-201ENST00000414407 COL5A3P25940 1745 aaPredicted RBP21.52■■□□□ 1.03
LINC00398-201ENST00000414407 TJP1Q07157 1748 aa21.52■■□□□ 1.03
LINC00398-201ENST00000414407 SNRPA1P09661 255 aaKnown RBP21.51■■□□□ 1.03
LINC00398-201ENST00000414407 ZNF853P0CG23 659 aa21.51■■□□□ 1.03
LINC00398-201ENST00000414407 CYP19A1P11511 503 aaPredicted RBP21.51■■□□□ 1.03
LINC00398-201ENST00000414407 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
LINC00398-201ENST00000414407 FLAD1Q8NFF5 587 aa21.51■■□□□ 1.03
LINC00398-201ENST00000414407 IFT57Q9NWB7 429 aa21.51■■□□□ 1.03
LINC00398-201ENST00000414407 STARD3NLO95772 234 aa21.5■■□□□ 1.03
LINC00398-201ENST00000414407 GNAI1P63096 354 aa21.5■■□□□ 1.03
LINC00398-201ENST00000414407 IL16Q14005 1332 aa21.5■■□□□ 1.03
LINC00398-201ENST00000414407 QSER1Q2KHR3 1735 aa21.49■■□□□ 1.03
LINC00398-201ENST00000414407 CRKLP46109 303 aaKnown RBP21.49■■□□□ 1.03
LINC00398-201ENST00000414407 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
LINC00398-201ENST00000414407 SSFA2P28290 1259 aa21.48■■□□□ 1.03
LINC00398-201ENST00000414407 LAS1LQ9Y4W2 734 aaKnown RBP21.48■■□□□ 1.03
LINC00398-201ENST00000414407 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
LINC00398-201ENST00000414407 GNPATO15228 680 aa21.47■■□□□ 1.03
LINC00398-201ENST00000414407 RPS6KA4O75676 772 aa21.47■■□□□ 1.03
LINC00398-201ENST00000414407 INTS5Q6P9B9 1019 aaKnown RBP21.47■■□□□ 1.03
LINC00398-201ENST00000414407 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
LINC00398-201ENST00000414407 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
LINC00398-201ENST00000414407 ADRA2BP18089 450 aa21.46■■□□□ 1.03
LINC00398-201ENST00000414407 SLC16A10Q8TF71 515 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms