RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
NUB1-201ENST00000413040 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 HOXC9P31274 260 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 SKOR2Q2VWA4 1001 aaPredicted RBP16.95■□□□□ 0.3
NUB1-201ENST00000413040 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
NUB1-201ENST00000413040 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 GNAI3P08754 354 aa16.95■□□□□ 0.3
NUB1-201ENST00000413040 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
NUB1-201ENST00000413040 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
NUB1-201ENST00000413040 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
NUB1-201ENST00000413040 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
NUB1-201ENST00000413040 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
NUB1-201ENST00000413040 CHAMP1Q96JM3 812 aa16.94■□□□□ 0.3
NUB1-201ENST00000413040 IGSF1Q8N6C5 1336 aa16.94■□□□□ 0.3
NUB1-201ENST00000413040 ANXA1P04083 346 aa16.93■□□□□ 0.3
NUB1-201ENST00000413040 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
NUB1-201ENST00000413040 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
NUB1-201ENST00000413040 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
NUB1-201ENST00000413040 AKAP12Q02952 1782 aa16.93■□□□□ 0.3
NUB1-201ENST00000413040 MX1P20591 662 aa16.93■□□□□ 0.3
NUB1-201ENST00000413040 TAF7Q15545 349 aaPredicted RBP16.93■□□□□ 0.3
NUB1-201ENST00000413040 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
NUB1-201ENST00000413040 NUCB2P80303 420 aa16.92■□□□□ 0.3
NUB1-201ENST00000413040 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
NUB1-201ENST00000413040 TPRNQ4KMQ1 711 aa16.92■□□□□ 0.3
NUB1-201ENST00000413040 SURF6O75683 361 aaKnown RBP16.91■□□□□ 0.3
NUB1-201ENST00000413040 CAVIN1Q6NZI2 390 aaKnown RBP16.91■□□□□ 0.3
NUB1-201ENST00000413040 RIMS1Q86UR5 1692 aaKnown RBP16.91■□□□□ 0.3
NUB1-201ENST00000413040 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
NUB1-201ENST00000413040 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
NUB1-201ENST00000413040 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
NUB1-201ENST00000413040 CEP170BQ9Y4F5 1589 aaPredicted RBP16.9■□□□□ 0.3
NUB1-201ENST00000413040 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
NUB1-201ENST00000413040 PTMSP20962 102 aa16.89■□□□□ 0.3
NUB1-201ENST00000413040 ATP8B2P98198 1209 aa16.89■□□□□ 0.3
NUB1-201ENST00000413040 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.29
NUB1-201ENST00000413040 MCCP23508 829 aa16.89■□□□□ 0.29
NUB1-201ENST00000413040 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
NUB1-201ENST00000413040 ANP32BQ92688 251 aaKnown RBP16.88■□□□□ 0.29
NUB1-201ENST00000413040 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 PSME1Q06323 249 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 UNC5CLQ8IV45 518 aa16.88■□□□□ 0.29
NUB1-201ENST00000413040 TEFQ10587 303 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 ESYT1Q9BSJ8 1104 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 KDRP35968 1356 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 MAP3K5Q99683 1374 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
NUB1-201ENST00000413040 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
NUB1-201ENST00000413040 KCNQ3O43525 872 aa16.86■□□□□ 0.29
NUB1-201ENST00000413040 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
NUB1-201ENST00000413040 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
NUB1-201ENST00000413040 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
NUB1-201ENST00000413040 NASPP49321 788 aaPredicted RBP16.85■□□□□ 0.29
NUB1-201ENST00000413040 KLHL40Q2TBA0 621 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
NUB1-201ENST00000413040 CHPF2Q9P2E5 772 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
NUB1-201ENST00000413040 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
NUB1-201ENST00000413040 CHMLP26374 656 aa16.85■□□□□ 0.29
NUB1-201ENST00000413040 NBPF7P0C2Y1 421 aaPredicted RBP16.84■□□□□ 0.29
NUB1-201ENST00000413040 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
NUB1-201ENST00000413040 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.29
NUB1-201ENST00000413040 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.29
NUB1-201ENST00000413040 ESPNB1AK53 854 aa16.83■□□□□ 0.28
NUB1-201ENST00000413040 RGPD8O14715 1765 aaPredicted RBP16.83■□□□□ 0.28
NUB1-201ENST00000413040 LMBRD1Q9NUN5 540 aa16.82■□□□□ 0.28
NUB1-201ENST00000413040 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
NUB1-201ENST00000413040 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
NUB1-201ENST00000413040 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
NUB1-201ENST00000413040 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
NUB1-201ENST00000413040 DTNBO60941 627 aa16.8■□□□□ 0.28
NUB1-201ENST00000413040 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
NUB1-201ENST00000413040 IL25Q9H293 177 aa16.8■□□□□ 0.28
NUB1-201ENST00000413040 DIP2AQ14689 1571 aa16.8■□□□□ 0.28
NUB1-201ENST00000413040 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
NUB1-201ENST00000413040 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
NUB1-201ENST00000413040 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
NUB1-201ENST00000413040 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
NUB1-201ENST00000413040 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
NUB1-201ENST00000413040 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
NUB1-201ENST00000413040 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
NUB1-201ENST00000413040 IP6K1Q92551 441 aa16.79■□□□□ 0.28
NUB1-201ENST00000413040 KIF13AQ9H1H9 1805 aa16.79■□□□□ 0.28
NUB1-201ENST00000413040 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms