RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 CCDC27Q2M243 656 aa35.17■■■■□ 3.22
CGREF1-204ENST00000402550 SLC52A2Q9HAB3 445 aa35.17■■■■□ 3.22
CGREF1-204ENST00000402550 TNS1Q9HBL0 1735 aaKnown RBP35.15■■■■□ 3.22
CGREF1-204ENST00000402550 TRIM35Q9UPQ4 493 aa35.14■■■■□ 3.22
CGREF1-204ENST00000402550 BTAF1O14981 1849 aa35.13■■■■□ 3.21
CGREF1-204ENST00000402550 SOCS7O14512 581 aa35.13■■■■□ 3.21
CGREF1-204ENST00000402550 TEFQ10587 303 aa35.13■■■■□ 3.21
CGREF1-204ENST00000402550 ZBED9Q6R2W3 1325 aa35.12■■■■□ 3.21
CGREF1-204ENST00000402550 WWC1Q8IX03 1113 aa35.11■■■■□ 3.21
CGREF1-204ENST00000402550 THUMPD2Q9BTF0 503 aaKnown RBP35.11■■■■□ 3.21
CGREF1-204ENST00000402550 PLSCR1O15162 318 aa35.1■■■■□ 3.21
CGREF1-204ENST00000402550 MRC1P22897 1456 aa35.09■■■■□ 3.21
CGREF1-204ENST00000402550 BAG6P46379 1132 aa35.08■■■■□ 3.21
CGREF1-204ENST00000402550 DEFB132Q7Z7B7 95 aa35.08■■■■□ 3.21
CGREF1-204ENST00000402550 CALD1Q05682 793 aaKnown RBP35.08■■■■□ 3.21
CGREF1-204ENST00000402550 ASAP1Q9ULH1 1129 aa35.08■■■■□ 3.21
CGREF1-204ENST00000402550 EN1Q05925 392 aaPredicted RBP35.07■■■■□ 3.2
CGREF1-204ENST00000402550 ATG3Q9NT62 314 aa35.06■■■■□ 3.2
CGREF1-204ENST00000402550 TAF7Q15545 349 aaPredicted RBP35.04■■■■□ 3.2
CGREF1-204ENST00000402550 WDR63Q8IWG1 891 aa35.04■■■■□ 3.2
CGREF1-204ENST00000402550 CAMKK2Q96RR4 588 aa35.04■■■■□ 3.2
CGREF1-204ENST00000402550 SIPA1L3O60292 1781 aaPredicted RBP35.03■■■■□ 3.2
CGREF1-204ENST00000402550 SMARCC1Q92922 1105 aaPredicted RBP35.03■■■■□ 3.2
CGREF1-204ENST00000402550 ZNF521Q96K83 1311 aa35.02■■■■□ 3.2
CGREF1-204ENST00000402550 SLC39A6Q13433 755 aa35■■■■□ 3.19
CGREF1-204ENST00000402550 PROM2Q8N271 834 aa35■■■■□ 3.19
CGREF1-204ENST00000402550 BTBD11A6QL63 1104 aa35■■■■□ 3.19
CGREF1-204ENST00000402550 EZH2Q15910 746 aaKnown RBP35■■■■□ 3.19
CGREF1-204ENST00000402550 PALLDQ8WX93 1383 aa34.99■■■■□ 3.19
CGREF1-204ENST00000402550 GOLGA2Q08379 1002 aa34.99■■■■□ 3.19
CGREF1-204ENST00000402550 MIS18AQ9NYP9 233 aa34.97■■■■□ 3.19
CGREF1-204ENST00000402550 TXNRD1Q16881 649 aa34.96■■■■□ 3.19
CGREF1-204ENST00000402550 ZNF790Q6PG37 636 aa34.96■■■■□ 3.19
CGREF1-204ENST00000402550 IL16Q14005 1332 aa34.96■■■■□ 3.19
CGREF1-204ENST00000402550 RGPD3A6NKT7 1758 aaPredicted RBP34.94■■■■□ 3.18
CGREF1-204ENST00000402550 RGPD4Q7Z3J3 1758 aa34.94■■■■□ 3.18
CGREF1-204ENST00000402550 LY75O60449 1722 aa34.94■■■■□ 3.18
CGREF1-204ENST00000402550 PTCD1O75127 700 aaKnown RBP34.93■■■■□ 3.18
CGREF1-204ENST00000402550 KCNQ3O43525 872 aa34.92■■■■□ 3.18
CGREF1-204ENST00000402550 TTC5Q8N0Z6 440 aa34.92■■■■□ 3.18
CGREF1-204ENST00000402550 LOC102724428A0A0B4J2F2 783 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 SIK1P57059 783 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 GNAI1P63096 354 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 RBM42Q9BTD8 480 aaKnown RBP34.91■■■■□ 3.18
CGREF1-204ENST00000402550 IFT57Q9NWB7 429 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 LAS1LQ9Y4W2 734 aaKnown RBP34.91■■■■□ 3.18
CGREF1-204ENST00000402550 PAPPAQ13219 1627 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 KCNQ4P56696 695 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 LRRC4BQ9NT99 713 aa34.91■■■■□ 3.18
CGREF1-204ENST00000402550 E9PSI1 815 aa34.9■■■■□ 3.18
CGREF1-204ENST00000402550 SLC27A3Q5K4L6 730 aa34.9■■■■□ 3.18
CGREF1-204ENST00000402550 CFAP44Q96MT7 982 aa34.9■■■■□ 3.18
CGREF1-204ENST00000402550 BABAM1Q9NWV8 329 aa34.9■■■■□ 3.18
CGREF1-204ENST00000402550 CCNL1Q9UK58 526 aaPredicted RBP34.9■■■■□ 3.18
CGREF1-204ENST00000402550 CHL1O00533 1208 aa34.89■■■■□ 3.18
CGREF1-204ENST00000402550 SLC4A9Q96Q91 983 aa34.89■■■■□ 3.18
CGREF1-204ENST00000402550 MYH16Q9H6N6 1097 aa34.89■■■■□ 3.18
CGREF1-204ENST00000402550 TSPYL4Q9UJ04 414 aa34.87■■■■□ 3.17
CGREF1-204ENST00000402550 ZNF496Q96IT1 587 aaPredicted RBP34.87■■■■□ 3.17
CGREF1-204ENST00000402550 ZNF853P0CG23 659 aa34.86■■■■□ 3.17
CGREF1-204ENST00000402550 ATP6V1AP38606 617 aa34.86■■■■□ 3.17
CGREF1-204ENST00000402550 CDCA7LQ96GN5 454 aa34.85■■■■□ 3.17
CGREF1-204ENST00000402550 KCPQ6ZWJ8 1503 aa34.85■■■■□ 3.17
CGREF1-204ENST00000402550 UBR2Q8IWV8 1755 aa34.85■■■■□ 3.17
CGREF1-204ENST00000402550 SLFN5Q08AF3 891 aa34.84■■■■□ 3.17
CGREF1-204ENST00000402550 FMNL2Q96PY5 1086 aa34.83■■■■□ 3.17
CGREF1-204ENST00000402550 RREB1Q92766 1687 aa34.83■■■■□ 3.17
CGREF1-204ENST00000402550 SPINK5Q9NQ38 1064 aaPredicted RBP34.83■■■■□ 3.17
CGREF1-204ENST00000402550 KDM3BQ7LBC6 1761 aa34.83■■■■□ 3.17
CGREF1-204ENST00000402550 ITPK1Q13572 414 aa34.81■■■■□ 3.16
CGREF1-204ENST00000402550 VSIG10Q8N0Z9 540 aa34.81■■■■□ 3.16
CGREF1-204ENST00000402550 EIF4A1P60842 406 aaKnown RBP34.8■■■■□ 3.16
CGREF1-204ENST00000402550 MBIPQ9NS73 344 aa34.8■■■■□ 3.16
CGREF1-204ENST00000402550 HEG1Q9ULI3 1381 aa34.79■■■■□ 3.16
CGREF1-204ENST00000402550 ZNF831Q5JPB2 1677 aa34.79■■■■□ 3.16
CGREF1-204ENST00000402550 FANCIQ9NVI1 1328 aa34.77■■■■□ 3.16
CGREF1-204ENST00000402550 TSR2Q969E8 191 aaKnown RBP34.77■■■■□ 3.16
CGREF1-204ENST00000402550 NUP188Q5SRE5 1749 aa34.76■■■■□ 3.15
CGREF1-204ENST00000402550 HMGB2P26583 209 aaKnown RBP34.75■■■■□ 3.15
CGREF1-204ENST00000402550 DNAJC10Q8IXB1 793 aa34.75■■■■□ 3.15
CGREF1-204ENST00000402550 TRMT2AQ8IZ69 625 aaKnown RBP34.75■■■■□ 3.15
CGREF1-204ENST00000402550 TAF1LQ8IZX4 1826 aa34.75■■■■□ 3.15
CGREF1-204ENST00000402550 DUSP27Q5VZP5 1158 aa34.74■■■■□ 3.15
CGREF1-204ENST00000402550 LINC00116Q8NCU8 138 aa34.74■■■■□ 3.15
CGREF1-204ENST00000402550 SNRPA1P09661 255 aaKnown RBP34.74■■■■□ 3.15
CGREF1-204ENST00000402550 GIGYF1O75420 1035 aaPredicted RBP34.72■■■■□ 3.15
CGREF1-204ENST00000402550 TEX13AQ9BXU3 409 aaPredicted RBP34.72■■■■□ 3.15
CGREF1-204ENST00000402550 C5P01031 1676 aa34.72■■■■□ 3.15
CGREF1-204ENST00000402550 PRAMEF22A3QJZ6 481 aa34.71■■■■□ 3.15
CGREF1-204ENST00000402550 TJP1Q07157 1748 aa34.71■■■■□ 3.15
CGREF1-204ENST00000402550 NBPF14Q5TI25 921 aa34.7■■■■□ 3.15
CGREF1-204ENST00000402550 USP16Q9Y5T5 823 aa34.7■■■■□ 3.15
CGREF1-204ENST00000402550 CICQ96RK0 1608 aaPredicted RBP34.7■■■■□ 3.15
CGREF1-204ENST00000402550 ANO8Q9HCE9 1232 aaPredicted RBP34.7■■■■□ 3.14
CGREF1-204ENST00000402550 CYP19A1P11511 503 aaPredicted RBP34.69■■■■□ 3.14
CGREF1-204ENST00000402550 KRT24Q2M2I5 525 aa34.69■■■■□ 3.14
CGREF1-204ENST00000402550 AKT1S1Q96B36 256 aa34.68■■■■□ 3.14
CGREF1-204ENST00000402550 ZNF827Q17R98 1081 aa34.67■■■■□ 3.14
CGREF1-204ENST00000402550 COL5A3P25940 1745 aaPredicted RBP34.67■■■■□ 3.14
CGREF1-204ENST00000402550 STARD3NLO95772 234 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms