RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
GAREM1-202ENST00000399218 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
GAREM1-202ENST00000399218 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
GAREM1-202ENST00000399218 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
GAREM1-202ENST00000399218 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
GAREM1-202ENST00000399218 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
GAREM1-202ENST00000399218 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
GAREM1-202ENST00000399218 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
GAREM1-202ENST00000399218 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
GAREM1-202ENST00000399218 NSD2O96028 1365 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 RXRBP28702 533 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
GAREM1-202ENST00000399218 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
GAREM1-202ENST00000399218 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 TRIM37O94972 964 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 ERC1Q8IUD2 1116 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
GAREM1-202ENST00000399218 FLIIQ13045 1269 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
GAREM1-202ENST00000399218 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
GAREM1-202ENST00000399218 KCNQ4P56696 695 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 CAVIN4Q5BKX8 364 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
GAREM1-202ENST00000399218 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
GAREM1-202ENST00000399218 CWC25Q9NXE8 425 aaPredicted RBP13.12□□□□□ -0.31
GAREM1-202ENST00000399218 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
GAREM1-202ENST00000399218 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
GAREM1-202ENST00000399218 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 KIF1BO60333 1816 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
GAREM1-202ENST00000399218 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
GAREM1-202ENST00000399218 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 HMGB2P26583 209 aaKnown RBP13.11□□□□□ -0.31
GAREM1-202ENST00000399218 PIBF1Q8WXW3 757 aa13.11□□□□□ -0.31
GAREM1-202ENST00000399218 REC8O95072 547 aa13.1□□□□□ -0.31
GAREM1-202ENST00000399218 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
GAREM1-202ENST00000399218 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
GAREM1-202ENST00000399218 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
GAREM1-202ENST00000399218 TRIM29Q14134 588 aa13.1□□□□□ -0.31
GAREM1-202ENST00000399218 ERICH6BQ5W0A0 696 aa13.1□□□□□ -0.31
GAREM1-202ENST00000399218 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
GAREM1-202ENST00000399218 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
GAREM1-202ENST00000399218 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
GAREM1-202ENST00000399218 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
GAREM1-202ENST00000399218 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
GAREM1-202ENST00000399218 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
GAREM1-202ENST00000399218 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
GAREM1-202ENST00000399218 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
GAREM1-202ENST00000399218 DRC7Q8IY82 874 aa13.08□□□□□ -0.31
GAREM1-202ENST00000399218 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.31
GAREM1-202ENST00000399218 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 PDE4AP27815 886 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 BAG6P46379 1132 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 CPLX2Q6PUV4 134 aaKnown RBP13.08□□□□□ -0.32
GAREM1-202ENST00000399218 KIAA0232Q92628 1395 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
GAREM1-202ENST00000399218 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
GAREM1-202ENST00000399218 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
GAREM1-202ENST00000399218 TDO2P48775 406 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
GAREM1-202ENST00000399218 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
GAREM1-202ENST00000399218 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
GAREM1-202ENST00000399218 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 CDC42BPBQ9Y5S2 1711 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
GAREM1-202ENST00000399218 USP5P45974 858 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
GAREM1-202ENST00000399218 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
GAREM1-202ENST00000399218 ABCC3O15438 1527 aa13.06□□□□□ -0.32
GAREM1-202ENST00000399218 A1BGP04217 495 aa13.06□□□□□ -0.32
GAREM1-202ENST00000399218 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
GAREM1-202ENST00000399218 ZNF772Q68DY9 489 aaPredicted RBP13.06□□□□□ -0.32
GAREM1-202ENST00000399218 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
GAREM1-202ENST00000399218 PRDM15P57071 1507 aaPredicted RBP13.06□□□□□ -0.32
GAREM1-202ENST00000399218 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
GAREM1-202ENST00000399218 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
GAREM1-202ENST00000399218 MAP3K5Q99683 1374 aa13.05□□□□□ -0.32
GAREM1-202ENST00000399218 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
GAREM1-202ENST00000399218 STK3Q13188 491 aa13.05□□□□□ -0.32
GAREM1-202ENST00000399218 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
GAREM1-202ENST00000399218 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
GAREM1-202ENST00000399218 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
GAREM1-202ENST00000399218 SLC5A1P13866 664 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms