RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 RIMS2Q9UQ26 1411 aa6.2□□□□□ -1.42
FGD4-201ENST00000395740 RGL2O15211 777 aa6.2□□□□□ -1.42
FGD4-201ENST00000395740 ABCB7O75027 752 aa6.2□□□□□ -1.42
FGD4-201ENST00000395740 HMGN5P82970 282 aaKnown RBP6.2□□□□□ -1.42
FGD4-201ENST00000395740 PLCD3Q8N3E9 789 aa6.2□□□□□ -1.42
FGD4-201ENST00000395740 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
FGD4-201ENST00000395740 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.2□□□□□ -1.42
FGD4-201ENST00000395740 AOX1Q06278 1338 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 ERC2O15083 957 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 TPM3P06753 285 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 UTP14CQ5TAP6 766 aaKnown RBP6.19□□□□□ -1.42
FGD4-201ENST00000395740 RBSNQ9H1K0 784 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 CABP2Q9NPB3 220 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 RGS12O14924 1447 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 CHD2O14647 1828 aaKnown RBP6.19□□□□□ -1.42
FGD4-201ENST00000395740 HMMRO75330 724 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 BRD1O95696 1058 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 IL13P35225 146 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 TWISTNBQ3B726 338 aaPredicted RBP6.19□□□□□ -1.42
FGD4-201ENST00000395740 MCTP1Q6DN14 999 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 POLKQ9UBT6 870 aa6.19□□□□□ -1.42
FGD4-201ENST00000395740 PRKAR2BP31323 418 aa6.18□□□□□ -1.42
FGD4-201ENST00000395740 RBM10P98175 930 aaKnown RBP6.18□□□□□ -1.42
FGD4-201ENST00000395740 GGNBP2Q9H3C7 697 aa6.18□□□□□ -1.42
FGD4-201ENST00000395740 MCCP23508 829 aa6.18□□□□□ -1.42
FGD4-201ENST00000395740 CAVIN1Q6NZI2 390 aaKnown RBP6.18□□□□□ -1.42
FGD4-201ENST00000395740 SRCIN1Q9C0H9 1055 aa6.18□□□□□ -1.42
FGD4-201ENST00000395740 MBIPQ9NS73 344 aa6.18□□□□□ -1.42
FGD4-201ENST00000395740 KIF13AQ9H1H9 1805 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
FGD4-201ENST00000395740 SRPK2P78362 688 aaKnown RBP6.17□□□□□ -1.42
FGD4-201ENST00000395740 MYRIPQ8NFW9 859 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 GPT2Q8TD30 523 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 ZDHHC9Q9Y397 364 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 CRYBG1Q9Y4K1 1723 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 PXDNLA1KZ92 1463 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 AGLP35573 1532 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 SAFB2Q14151 953 aaKnown RBP eCLIP6.17□□□□□ -1.42
FGD4-201ENST00000395740 CEP85Q6P2H3 762 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 RBM42Q9BTD8 480 aaKnown RBP6.17□□□□□ -1.42
FGD4-201ENST00000395740 TSPY26PQ9H489 355 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 TECPR2O15040 1411 aa6.17□□□□□ -1.42
FGD4-201ENST00000395740 SALL3Q9BXA9 1300 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 UQCRHLA0A096LP55 91 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 UQCRHP07919 91 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 SDSP20132 328 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 KIAA2012Q0VF49 1180 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 STAP2Q9UGK3 403 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 XRN1Q8IZH2 1706 aaKnown RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 TOPAZ1Q8N9V7 1692 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 LRRC37A3O60309 1634 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 CHL1O00533 1208 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 PDE4CQ08493 712 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 PIBF1Q8WXW3 757 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 ARXQ96QS3 562 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 CCDC94Q9BW85 323 aaPredicted RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 CDK19Q9BWU1 502 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 FMN2Q9NZ56 1722 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 TMEM63CQ9P1W3 806 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 R3HCC1Q9Y3T6 440 aaKnown RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 CPS1P31327 1500 aa6.16□□□□□ -1.42
FGD4-201ENST00000395740 WDR33Q9C0J8 1336 aaKnown RBP6.16□□□□□ -1.42
FGD4-201ENST00000395740 CCT4P50991 539 aaKnown RBP6.15□□□□□ -1.42
FGD4-201ENST00000395740 SYCP1Q15431 976 aa6.15□□□□□ -1.42
FGD4-201ENST00000395740 STK26Q9P289 416 aa6.15□□□□□ -1.42
FGD4-201ENST00000395740 USP25Q9UHP3 1055 aa6.15□□□□□ -1.42
FGD4-201ENST00000395740 USP54Q70EL1 1684 aa6.15□□□□□ -1.42
FGD4-201ENST00000395740 TCHHQ07283 1943 aa6.15□□□□□ -1.42
FGD4-201ENST00000395740 FAM208AQ9UK61 1670 aaKnown RBP6.15□□□□□ -1.42
FGD4-201ENST00000395740 GTPBP4Q9BZE4 634 aaKnown RBP6.15□□□□□ -1.43
FGD4-201ENST00000395740 BABAM1Q9NWV8 329 aa6.15□□□□□ -1.43
FGD4-201ENST00000395740 DIP2AQ14689 1571 aa6.15□□□□□ -1.43
FGD4-201ENST00000395740 TSPYL6Q8N831 410 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 TMX3Q96JJ7 454 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 ATP6V1DQ9Y5K8 247 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 RIMS1Q86UR5 1692 aaKnown RBP6.14□□□□□ -1.43
FGD4-201ENST00000395740 NRXN3Q9Y4C0 1643 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 HTATSF1O43719 755 aaKnown RBP6.14□□□□□ -1.43
FGD4-201ENST00000395740 PDE1AP54750 535 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 C8orf58Q8NAV2 365 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 PHACTR3Q96KR7 559 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 PRAM1Q96QH2 718 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 ESYT1Q9BSJ8 1104 aa6.14□□□□□ -1.43
FGD4-201ENST00000395740 TPRNQ4KMQ1 711 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 CCDC183Q5T5S1 534 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 RPAP1Q9BWH6 1393 aaPredicted RBP6.13□□□□□ -1.43
FGD4-201ENST00000395740 FAM193AP78312 1265 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 FKBP5Q13451 457 aaPredicted RBP6.13□□□□□ -1.43
FGD4-201ENST00000395740 HS6ST3Q8IZP7 471 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 CABP1Q9NZU7 370 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 CRB1P82279 1406 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 TTC21BQ7Z4L5 1316 aa6.13□□□□□ -1.43
FGD4-201ENST00000395740 SYCE3A1L190 88 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 KIF20AO95235 890 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 GNAI3P08754 354 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 MX1P20591 662 aa6.12□□□□□ -1.43
FGD4-201ENST00000395740 DMTNQ08495 405 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms