RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 TSPYL6Q8N831 410 aa7.14□□□□□ -1.27
MATR3-230ENST00000394800 CDK12Q9NYV4 1490 aaPredicted RBP7.14□□□□□ -1.27
MATR3-230ENST00000394800 OVOS2A0A0J9YW53 1432 aa7.14□□□□□ -1.27
MATR3-230ENST00000394800 OVOS2Q6IE36 1432 aa7.14□□□□□ -1.27
MATR3-230ENST00000394800 EIF4A2Q14240 407 aaKnown RBP7.14□□□□□ -1.27
MATR3-230ENST00000394800 ZRSR2Q15696 482 aaKnown RBP7.14□□□□□ -1.27
MATR3-230ENST00000394800 ELL2O00472 640 aaPredicted RBP7.13□□□□□ -1.27
MATR3-230ENST00000394800 RIMS1Q86UR5 1692 aaKnown RBP7.13□□□□□ -1.27
MATR3-230ENST00000394800 TRIM27P14373 513 aa7.13□□□□□ -1.27
MATR3-230ENST00000394800 PEAK1Q9H792 1746 aa7.13□□□□□ -1.27
MATR3-230ENST00000394800 VASPP50552 380 aaPredicted RBP7.13□□□□□ -1.27
MATR3-230ENST00000394800 NFE2L2Q16236 605 aa7.13□□□□□ -1.27
MATR3-230ENST00000394800 NUTM2GQ5VZR2 741 aa7.13□□□□□ -1.27
MATR3-230ENST00000394800 SUDS3Q9H7L9 328 aaPredicted RBP7.13□□□□□ -1.27
MATR3-230ENST00000394800 SH3BGRP55822 239 aaPredicted RBP7.12□□□□□ -1.27
MATR3-230ENST00000394800 SULT6B1Q6IMI4 303 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 MAP3K19Q56UN5 1328 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 CEP170BQ9Y4F5 1589 aaPredicted RBP7.12□□□□□ -1.27
MATR3-230ENST00000394800 XRN1Q8IZH2 1706 aaKnown RBP7.12□□□□□ -1.27
MATR3-230ENST00000394800 TPD52L2O43399 206 aaKnown RBP7.12□□□□□ -1.27
MATR3-230ENST00000394800 DIP2AQ14689 1571 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 MS4A1P11836 297 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 PTCH1Q13635 1447 aa7.12□□□□□ -1.27
MATR3-230ENST00000394800 NGDNQ8NEJ9 315 aaKnown RBP7.11□□□□□ -1.27
MATR3-230ENST00000394800 KRT24Q2M2I5 525 aa7.11□□□□□ -1.27
MATR3-230ENST00000394800 FRMD4BQ9Y2L6 1034 aa7.11□□□□□ -1.27
MATR3-230ENST00000394800 IL16Q14005 1332 aa7.11□□□□□ -1.27
MATR3-230ENST00000394800 C8orf34Q49A92 452 aa7.11□□□□□ -1.27
MATR3-230ENST00000394800 SPTY2D1Q68D10 685 aaPredicted RBP7.11□□□□□ -1.27
MATR3-230ENST00000394800 NALCNQ8IZF0 1738 aa7.11□□□□□ -1.27
MATR3-230ENST00000394800 NOB1Q9ULX3 412 aaKnown RBP7.11□□□□□ -1.27
MATR3-230ENST00000394800 FAM43BQ6ZT52 329 aaPredicted RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 HTATSF1O43719 755 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 VAMP4O75379 141 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 TNNT1P13805 278 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 MVPQ14764 893 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 ZKSCAN2Q63HK3 967 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 DZIP1LQ8IYY4 767 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 MBIPQ9NS73 344 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 PIK3C2AO00443 1686 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 FOXO3O43524 673 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 ZNF853P0CG23 659 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 ATF7IPQ6VMQ6 1270 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 C8orf58Q8NAV2 365 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 PNNQ9H307 717 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 USP31Q70CQ4 1352 aa7.1□□□□□ -1.27
MATR3-230ENST00000394800 CGNQ9P2M7 1197 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 CHD2O14647 1828 aaKnown RBP7.1□□□□□ -1.27
MATR3-230ENST00000394800 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 CEP89Q96ST8 783 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 GPBP1L1Q9HC44 474 aaPredicted RBP7.09□□□□□ -1.27
MATR3-230ENST00000394800 MCM10Q7L590 875 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 APBB1IPQ7Z5R6 666 aaPredicted RBP7.09□□□□□ -1.27
MATR3-230ENST00000394800 DNAI2Q9GZS0 605 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
MATR3-230ENST00000394800 NLRP6P59044 892 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 IPO9Q96P70 1041 aaKnown RBP7.09□□□□□ -1.27
MATR3-230ENST00000394800 DYTNA2CJ06 578 aa7.09□□□□□ -1.27
MATR3-230ENST00000394800 MARF1Q9Y4F3 1742 aaKnown RBP7.09□□□□□ -1.28
MATR3-230ENST00000394800 VGLL3A8MV65 326 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 TMCO5BA8MYB1 307 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 ANKLE2Q86XL3 938 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 NAP1L4Q99733 375 aaKnown RBP7.08□□□□□ -1.28
MATR3-230ENST00000394800 SEC24BO95487 1268 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
MATR3-230ENST00000394800 ADAMTSL3P82987 1691 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 RGPD1P0DJD0 1748 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 G3BP2Q9UN86 482 aaKnown RBP7.08□□□□□ -1.28
MATR3-230ENST00000394800 DHX16O60231 1041 aaKnown RBP7.08□□□□□ -1.28
MATR3-230ENST00000394800 CHAF1AQ13111 956 aaPredicted RBP7.08□□□□□ -1.28
MATR3-230ENST00000394800 EYA1Q99502 592 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 PNMA2Q9UL42 364 aa7.08□□□□□ -1.28
MATR3-230ENST00000394800 MIS18AQ9NYP9 233 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 BTN2A1Q7KYR7 527 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 ITPRIPQ8IWB1 547 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 MORC4Q8TE76 937 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 HDAC1Q13547 482 aaPredicted RBP7.07□□□□□ -1.28
MATR3-230ENST00000394800 WDR75Q8IWA0 830 aaKnown RBP7.07□□□□□ -1.28
MATR3-230ENST00000394800 FMN2Q9NZ56 1722 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 ZBTB40Q9NUA8 1239 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 RBM28Q9NW13 759 aaKnown RBP7.07□□□□□ -1.28
MATR3-230ENST00000394800 TTC21AQ8NDW8 1320 aa7.07□□□□□ -1.28
MATR3-230ENST00000394800 ABTB2Q8N961 1025 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 PRPF38AQ8NAV1 312 aaKnown RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 ZCRB1Q8TBF4 217 aaKnown RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 PDZRN3Q9UPQ7 1066 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 PIK3R4Q99570 1358 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 hCG_2014768A0A024R1R8 64 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 TWISTNBQ3B726 338 aaPredicted RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 MPNDQ8N594 471 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 ORAI2Q96SN7 254 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 GNAI1P63096 354 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 XPCQ01831 940 aaPredicted RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 MTHFSDQ2M296 383 aaKnown RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
MATR3-230ENST00000394800 MRPL50Q8N5N7 158 aaKnown RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 LTV1Q96GA3 475 aaPredicted RBP7.06□□□□□ -1.28
MATR3-230ENST00000394800 AMPHP49418 695 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms