RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
ZNF541-203ENST00000391901 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
ZNF541-203ENST00000391901 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
ZNF541-203ENST00000391901 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
ZNF541-203ENST00000391901 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
ZNF541-203ENST00000391901 STARD3NLO95772 234 aa17.19■□□□□ 0.34
ZNF541-203ENST00000391901 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
ZNF541-203ENST00000391901 TSPY26PQ9H489 355 aa17.19■□□□□ 0.34
ZNF541-203ENST00000391901 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
ZNF541-203ENST00000391901 PRPF40BQ6NWY9 871 aaKnown RBP17.18■□□□□ 0.34
ZNF541-203ENST00000391901 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 KRT24Q2M2I5 525 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
ZNF541-203ENST00000391901 STK38Q15208 465 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 HYPKQ9NX55 129 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 XBP1P17861 261 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 KRT85P78386 507 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
ZNF541-203ENST00000391901 A0A087WZG4 1122 aa17.17■□□□□ 0.34
ZNF541-203ENST00000391901 TRIM5Q9C035 493 aa17.17■□□□□ 0.34
ZNF541-203ENST00000391901 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
ZNF541-203ENST00000391901 IDH1O75874 414 aaKnown RBP17.17■□□□□ 0.34
ZNF541-203ENST00000391901 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
ZNF541-203ENST00000391901 MPNDQ8N594 471 aa17.17■□□□□ 0.34
ZNF541-203ENST00000391901 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
ZNF541-203ENST00000391901 ANKRD20A12PQ8NF67 263 aa17.16■□□□□ 0.34
ZNF541-203ENST00000391901 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
ZNF541-203ENST00000391901 CCDC47Q96A33 483 aaKnown RBP17.16■□□□□ 0.34
ZNF541-203ENST00000391901 PCMTD1Q96MG8 357 aaPredicted RBP17.16■□□□□ 0.34
ZNF541-203ENST00000391901 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
ZNF541-203ENST00000391901 VAMP4O75379 141 aa17.16■□□□□ 0.34
ZNF541-203ENST00000391901 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
ZNF541-203ENST00000391901 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
ZNF541-203ENST00000391901 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 NUCB1Q02818 461 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
ZNF541-203ENST00000391901 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 BRMS1Q9HCU9 246 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 LETM1O95202 739 aaPredicted RBP17.15■□□□□ 0.34
ZNF541-203ENST00000391901 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 NACAP1Q9BZK3 213 aa17.15■□□□□ 0.34
ZNF541-203ENST00000391901 KRT32Q14532 448 aa17.14■□□□□ 0.34
ZNF541-203ENST00000391901 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.34
ZNF541-203ENST00000391901 ZNF396Q96N95 335 aaPredicted RBP17.14■□□□□ 0.34
ZNF541-203ENST00000391901 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
ZNF541-203ENST00000391901 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
ZNF541-203ENST00000391901 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
ZNF541-203ENST00000391901 NPATQ14207 1427 aa17.14■□□□□ 0.33
ZNF541-203ENST00000391901 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
ZNF541-203ENST00000391901 ME1P48163 572 aa17.14■□□□□ 0.33
ZNF541-203ENST00000391901 NAT10Q9H0A0 1025 aaKnown RBP17.14■□□□□ 0.33
ZNF541-203ENST00000391901 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.33
ZNF541-203ENST00000391901 C8orf34Q49A92 452 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
ZNF541-203ENST00000391901 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
ZNF541-203ENST00000391901 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
ZNF541-203ENST00000391901 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 SSFA2P28290 1259 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 KCNA6P17658 529 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
ZNF541-203ENST00000391901 IPO7O95373 1038 aaKnown RBP17.11■□□□□ 0.33
ZNF541-203ENST00000391901 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
ZNF541-203ENST00000391901 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
ZNF541-203ENST00000391901 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 EYA1Q99502 592 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 ATP7AQ04656 1500 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
ZNF541-203ENST00000391901 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
ZNF541-203ENST00000391901 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
ZNF541-203ENST00000391901 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 TDO2P48775 406 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
ZNF541-203ENST00000391901 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 ABCC1P33527 1531 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 SDSP20132 328 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 GPTP24298 496 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
ZNF541-203ENST00000391901 SPC24Q8NBT2 197 aa17.1■□□□□ 0.33
ZNF541-203ENST00000391901 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms