RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
LTN1-203ENST00000389195 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
LTN1-203ENST00000389195 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
LTN1-203ENST00000389195 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
LTN1-203ENST00000389195 CYP27B1O15528 508 aa12.78□□□□□ -0.36
LTN1-203ENST00000389195 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
LTN1-203ENST00000389195 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
LTN1-203ENST00000389195 MYL6BP14649 208 aa12.77□□□□□ -0.36
LTN1-203ENST00000389195 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.36
LTN1-203ENST00000389195 SMC5Q8IY18 1101 aa12.77□□□□□ -0.36
LTN1-203ENST00000389195 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
LTN1-203ENST00000389195 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
LTN1-203ENST00000389195 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
LTN1-203ENST00000389195 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.37
LTN1-203ENST00000389195 MEGF6O75095 1541 aa12.77□□□□□ -0.37
LTN1-203ENST00000389195 EP400Q96L91 3159 aa12.77□□□□□ -0.37
LTN1-203ENST00000389195 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 PIP4K2BP78356 416 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
LTN1-203ENST00000389195 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
LTN1-203ENST00000389195 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
LTN1-203ENST00000389195 MFAP1P55081 439 aaKnown RBP12.75□□□□□ -0.37
LTN1-203ENST00000389195 NUCB1Q02818 461 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 SLIT3O75094 1523 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
LTN1-203ENST00000389195 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
LTN1-203ENST00000389195 EVA1CP58658 441 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
LTN1-203ENST00000389195 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
LTN1-203ENST00000389195 PHKG2P15735 406 aa12.74□□□□□ -0.37
LTN1-203ENST00000389195 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
LTN1-203ENST00000389195 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
LTN1-203ENST00000389195 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
LTN1-203ENST00000389195 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
LTN1-203ENST00000389195 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
LTN1-203ENST00000389195 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
LTN1-203ENST00000389195 A0A0G2JS52 829 aa12.73□□□□□ -0.37
LTN1-203ENST00000389195 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
LTN1-203ENST00000389195 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
LTN1-203ENST00000389195 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
LTN1-203ENST00000389195 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
LTN1-203ENST00000389195 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
LTN1-203ENST00000389195 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
LTN1-203ENST00000389195 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
LTN1-203ENST00000389195 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
LTN1-203ENST00000389195 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
LTN1-203ENST00000389195 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
LTN1-203ENST00000389195 PTPRCP08575 1304 aa12.72□□□□□ -0.37
LTN1-203ENST00000389195 ZNF790Q6PG37 636 aa12.71□□□□□ -0.37
LTN1-203ENST00000389195 CAMTA1Q9Y6Y1 1673 aa12.71□□□□□ -0.37
LTN1-203ENST00000389195 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
LTN1-203ENST00000389195 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
LTN1-203ENST00000389195 AAMPQ13685 434 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 ANKRD44Q8N8A2 993 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 ATP10DQ9P241 1426 aa12.7□□□□□ -0.38
LTN1-203ENST00000389195 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
LTN1-203ENST00000389195 KIF1AQ12756 1690 aa12.69□□□□□ -0.38
LTN1-203ENST00000389195 CABP4P57796 275 aa12.69□□□□□ -0.38
LTN1-203ENST00000389195 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
LTN1-203ENST00000389195 DCCP43146 1447 aa12.69□□□□□ -0.38
LTN1-203ENST00000389195 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
LTN1-203ENST00000389195 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
LTN1-203ENST00000389195 GNAI2P04899 355 aa12.68□□□□□ -0.38
LTN1-203ENST00000389195 ARXQ96QS3 562 aa12.68□□□□□ -0.38
LTN1-203ENST00000389195 CCT4P50991 539 aaKnown RBP12.67□□□□□ -0.38
LTN1-203ENST00000389195 PDIA6Q15084 440 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
LTN1-203ENST00000389195 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
LTN1-203ENST00000389195 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
LTN1-203ENST00000389195 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
LTN1-203ENST00000389195 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 GCC1Q96CN9 775 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
LTN1-203ENST00000389195 ADCY9O60503 1353 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
LTN1-203ENST00000389195 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 COL18A1P39060 1754 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
LTN1-203ENST00000389195 PA2G4Q9UQ80 394 aaKnown RBP12.66□□□□□ -0.38
LTN1-203ENST00000389195 A1BGP04217 495 aa12.65□□□□□ -0.38
LTN1-203ENST00000389195 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
LTN1-203ENST00000389195 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
LTN1-203ENST00000389195 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
LTN1-203ENST00000389195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
LTN1-203ENST00000389195 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms