RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 A2ML1A8K2U0 1454 aa8.73□□□□□ -1.01
CCDC93-202ENST00000376300 TWISTNBQ3B726 338 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-202ENST00000376300 RRP9O43818 475 aaKnown RBP8.73□□□□□ -1.01
CCDC93-202ENST00000376300 VPS53Q5VIR6 699 aa8.73□□□□□ -1.01
CCDC93-202ENST00000376300 ARGLU1Q9NWB6 273 aaPredicted RBP8.73□□□□□ -1.01
CCDC93-202ENST00000376300 RTCBQ9Y3I0 505 aaKnown RBP8.73□□□□□ -1.01
CCDC93-202ENST00000376300 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
CCDC93-202ENST00000376300 NAP1L1P55209 391 aaKnown RBP8.73□□□□□ -1.01
CCDC93-202ENST00000376300 CCDC184Q52MB2 194 aa8.73□□□□□ -1.01
CCDC93-202ENST00000376300 DEFB132Q7Z7B7 95 aa8.73□□□□□ -1.01
CCDC93-202ENST00000376300 JARID2Q92833 1246 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-202ENST00000376300 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 KDM5DQ9BY66 1539 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 VPS37CA5D8V6 355 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-202ENST00000376300 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-202ENST00000376300 CEP89Q96ST8 783 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-202ENST00000376300 CCDC30Q5VVM6 783 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 SASS6Q6UVJ0 657 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 JCADQ9P266 1359 aa8.72□□□□□ -1.01
CCDC93-202ENST00000376300 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.01
CCDC93-202ENST00000376300 ANO2Q9NQ90 1003 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 DIAPH3Q9NSV4 1193 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 LEKR1Q6ZMV7 388 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 SIRT1Q96EB6 747 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 NFE2L2Q16236 605 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 FAM196AQ6ZSG2 479 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 GPATCH3Q96I76 525 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 TSPYL1Q9H0U9 437 aa8.71□□□□□ -1.01
CCDC93-202ENST00000376300 EN1Q05925 392 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 HSP90B2PQ58FF3 399 aa8.71□□□□□ -1.02
CCDC93-202ENST00000376300 CGNQ9P2M7 1197 aaKnown RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 PRPF40AO75400 957 aaKnown RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 GJD4Q96KN9 370 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 A0A1W2PP64 1363 aa8.71□□□□□ -1.02
CCDC93-202ENST00000376300 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.02
CCDC93-202ENST00000376300 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 C22orf23Q9BZE7 217 aa8.71□□□□□ -1.02
CCDC93-202ENST00000376300 TRMT112Q9UI30 125 aaKnown RBP8.71□□□□□ -1.02
CCDC93-202ENST00000376300 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
CCDC93-202ENST00000376300 PNISRQ8TF01 805 aaKnown RBP8.7□□□□□ -1.02
CCDC93-202ENST00000376300 CENPHQ9H3R5 247 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 SPATA31A3Q5VYP0 1347 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 NBPF5PQ86XG9 351 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-202ENST00000376300 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 MTERF4Q7Z6M4 381 aaKnown RBP8.7□□□□□ -1.02
CCDC93-202ENST00000376300 FAM177A1Q8N128 213 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-202ENST00000376300 ADGRL3Q9HAR2 1447 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 TPM1P09493 284 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 FAM193AP78312 1265 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 DNMT1P26358 1616 aaKnown RBP8.7□□□□□ -1.02
CCDC93-202ENST00000376300 ABCA9Q8IUA7 1624 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 TRPM2O94759 1503 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 ADGRL2O95490 1459 aa8.7□□□□□ -1.02
CCDC93-202ENST00000376300 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 ZBTB7AO95365 584 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-202ENST00000376300 GRPEL1Q9HAV7 217 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 ABCC3O15438 1527 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 DUSP27Q5VZP5 1158 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 CAGE1Q8TC20 777 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 SIL1Q9H173 461 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 CCDC173Q0VFZ6 552 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 SHROOM2Q13796 1616 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 HMMRO75330 724 aa8.69□□□□□ -1.02
CCDC93-202ENST00000376300 RBM5P52756 815 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC93-202ENST00000376300 AXDND1Q5T1B0 1012 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-202ENST00000376300 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 HMGB2P26583 209 aaKnown RBP8.68□□□□□ -1.02
CCDC93-202ENST00000376300 MTHFSDQ2M296 383 aaKnown RBP8.68□□□□□ -1.02
CCDC93-202ENST00000376300 TRAPPC3LQ5T215 181 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 ZBED9Q6R2W3 1325 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 FLT4P35916 1363 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 TSPY26PQ9H489 355 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 CFAP43Q8NDM7 1665 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 ZKSCAN2Q63HK3 967 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 ANKRD36BQ8N2N9 1353 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 SMC2O95347 1197 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC93-202ENST00000376300 R3HDM1Q15032 1099 aaKnown RBP8.68□□□□□ -1.02
CCDC93-202ENST00000376300 ARHGEF25Q86VW2 580 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
CCDC93-202ENST00000376300 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
CCDC93-202ENST00000376300 MARCH6O60337 910 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 UBTFL1P0CB47 393 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-202ENST00000376300 PANK1Q8TE04 598 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 LGR6Q9HBX8 967 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 SPINK5Q9NQ38 1064 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-202ENST00000376300 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 IPO4Q8TEX9 1081 aaKnown RBP8.67□□□□□ -1.02
CCDC93-202ENST00000376300 PHACTR3Q96KR7 559 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
CCDC93-202ENST00000376300 PREX2Q70Z35 1606 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms