RNA–Protein interactions for RNA: ENST00000375127.5

TMCO4-202, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 1 (best) BASIC

Gene TMCO4, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-202ENST00000375127 CHL1O00533 1208 aa15.53■□□□□ 0.08
TMCO4-202ENST00000375127 INTS3Q68E01 1043 aaKnown RBP15.52■□□□□ 0.07
TMCO4-202ENST00000375127 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.07
TMCO4-202ENST00000375127 SNX21Q969T3 373 aa15.52■□□□□ 0.07
TMCO4-202ENST00000375127 PDCL3Q9H2J4 239 aa15.52■□□□□ 0.07
TMCO4-202ENST00000375127 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
TMCO4-202ENST00000375127 ARHGEF10O15013 1369 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 KDRP35968 1356 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 MSH6P52701 1360 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 DDIT3P35638 169 aa15.51■□□□□ 0.07
TMCO4-202ENST00000375127 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
TMCO4-202ENST00000375127 GSPT1P15170 499 aaKnown RBP15.5■□□□□ 0.07
TMCO4-202ENST00000375127 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
TMCO4-202ENST00000375127 DCTPP1Q9H773 170 aa15.5■□□□□ 0.07
TMCO4-202ENST00000375127 CD2BP2O95400 341 aaKnown RBP15.49■□□□□ 0.07
TMCO4-202ENST00000375127 TRIM44Q96DX7 344 aaPredicted RBP15.49■□□□□ 0.07
TMCO4-202ENST00000375127 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
TMCO4-202ENST00000375127 RGS12O14924 1447 aa15.49■□□□□ 0.07
TMCO4-202ENST00000375127 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
TMCO4-202ENST00000375127 C16orf71Q8IYS4 520 aaPredicted RBP15.49■□□□□ 0.07
TMCO4-202ENST00000375127 KCNH5Q8NCM2 988 aa15.49■□□□□ 0.07
TMCO4-202ENST00000375127 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
TMCO4-202ENST00000375127 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
TMCO4-202ENST00000375127 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
TMCO4-202ENST00000375127 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
TMCO4-202ENST00000375127 LGR6Q9HBX8 967 aa15.48■□□□□ 0.07
TMCO4-202ENST00000375127 RTF1Q92541 710 aaKnown RBP15.48■□□□□ 0.07
TMCO4-202ENST00000375127 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
TMCO4-202ENST00000375127 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
TMCO4-202ENST00000375127 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
TMCO4-202ENST00000375127 PTMSP20962 102 aa15.47■□□□□ 0.07
TMCO4-202ENST00000375127 KIAA0232Q92628 1395 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 CDC45O75419 566 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
TMCO4-202ENST00000375127 SKOR2Q2VWA4 1001 aaPredicted RBP15.46■□□□□ 0.07
TMCO4-202ENST00000375127 CEP85Q6P2H3 762 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 CRB1P82279 1406 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 OTUD7AQ8TE49 926 aaPredicted RBP15.46■□□□□ 0.07
TMCO4-202ENST00000375127 MEIS3Q99687 375 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
TMCO4-202ENST00000375127 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.07
TMCO4-202ENST00000375127 GNAT3A8MTJ3 354 aa15.45■□□□□ 0.06
TMCO4-202ENST00000375127 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
TMCO4-202ENST00000375127 RPAP2Q8IXW5 612 aaPredicted RBP15.45■□□□□ 0.06
TMCO4-202ENST00000375127 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
TMCO4-202ENST00000375127 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 TERF1P54274 439 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 TTC22Q5TAA0 569 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 PTPRCP08575 1304 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 APBB1O00213 710 aa15.44■□□□□ 0.06
TMCO4-202ENST00000375127 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
TMCO4-202ENST00000375127 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
TMCO4-202ENST00000375127 PPP1R9BQ96SB3 815 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 KCNQ3O43525 872 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 G2E3Q7L622 706 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 GAS2L3Q86XJ1 694 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
TMCO4-202ENST00000375127 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 K7ELQ4 463 aaPredicted RBP15.42■□□□□ 0.06
TMCO4-202ENST00000375127 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 GBP4Q96PP9 640 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 SLIT3O75094 1523 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 PXDNQ92626 1479 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 ERBB3P21860 1342 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 F6X3S4 739 aa15.42■□□□□ 0.06
TMCO4-202ENST00000375127 OFD1O75665 1012 aa15.41■□□□□ 0.06
TMCO4-202ENST00000375127 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
TMCO4-202ENST00000375127 ZNF530Q6P9A1 599 aaPredicted RBP15.41■□□□□ 0.06
TMCO4-202ENST00000375127 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
TMCO4-202ENST00000375127 KIAA1211Q6ZU35 1233 aa15.41■□□□□ 0.06
TMCO4-202ENST00000375127 DCCP43146 1447 aa15.4■□□□□ 0.06
TMCO4-202ENST00000375127 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
TMCO4-202ENST00000375127 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
TMCO4-202ENST00000375127 SDSP20132 328 aa15.39■□□□□ 0.05
TMCO4-202ENST00000375127 ZSCAN30Q86W11 494 aa15.39■□□□□ 0.05
TMCO4-202ENST00000375127 TNS3Q68CZ2 1445 aa15.39■□□□□ 0.05
TMCO4-202ENST00000375127 USP26Q9BXU7 913 aa15.38■□□□□ 0.05
TMCO4-202ENST00000375127 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
TMCO4-202ENST00000375127 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.37■□□□□ 0.05
TMCO4-202ENST00000375127 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
TMCO4-202ENST00000375127 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
TMCO4-202ENST00000375127 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
TMCO4-202ENST00000375127 ANXA1P04083 346 aa15.36■□□□□ 0.05
TMCO4-202ENST00000375127 EIF2S2P20042 333 aaKnown RBP15.35■□□□□ 0.05
TMCO4-202ENST00000375127 CCT4P50991 539 aaKnown RBP15.35■□□□□ 0.05
TMCO4-202ENST00000375127 RABEP1Q15276 862 aa15.35■□□□□ 0.05
TMCO4-202ENST00000375127 TAF7Q15545 349 aaPredicted RBP15.35■□□□□ 0.05
TMCO4-202ENST00000375127 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
TMCO4-202ENST00000375127 HMMRO75330 724 aa15.34■□□□□ 0.05
TMCO4-202ENST00000375127 SSFA2P28290 1259 aa15.34■□□□□ 0.05
TMCO4-202ENST00000375127 HS1BP3Q53T59 392 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms