RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ARHGEF10O15013 1369 aa21.02■□□□□ 0.96
RXRB-201ENST00000374680 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.95
RXRB-201ENST00000374680 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
RXRB-201ENST00000374680 NCLP19338 710 aaKnown RBP21.01■□□□□ 0.95
RXRB-201ENST00000374680 CASC1Q6TDU7 716 aa21.01■□□□□ 0.95
RXRB-201ENST00000374680 NUTM1Q86Y26 1132 aa21.01■□□□□ 0.95
RXRB-201ENST00000374680 ZGPATQ8N5A5 531 aaKnown RBP21■□□□□ 0.95
RXRB-201ENST00000374680 DDIT3P35638 169 aa20.99■□□□□ 0.95
RXRB-201ENST00000374680 ORAI2Q96SN7 254 aa20.98■□□□□ 0.95
RXRB-201ENST00000374680 FOXD4L6Q3SYB3 417 aaPredicted RBP20.98■□□□□ 0.95
RXRB-201ENST00000374680 FOXD4L3Q6VB84 417 aaPredicted RBP20.98■□□□□ 0.95
RXRB-201ENST00000374680 RAB3GAP1Q15042 981 aa20.98■□□□□ 0.95
RXRB-201ENST00000374680 TPRNQ4KMQ1 711 aa20.98■□□□□ 0.95
RXRB-201ENST00000374680 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
RXRB-201ENST00000374680 GBP4Q96PP9 640 aa20.98■□□□□ 0.95
RXRB-201ENST00000374680 LRRCC1Q9C099 1032 aa20.98■□□□□ 0.95
RXRB-201ENST00000374680 DDX11L8A8MPP1 907 aa20.97■□□□□ 0.95
RXRB-201ENST00000374680 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
RXRB-201ENST00000374680 UBTFL1P0CB47 393 aaPredicted RBP20.97■□□□□ 0.95
RXRB-201ENST00000374680 USP44Q9H0E7 712 aa20.97■□□□□ 0.95
RXRB-201ENST00000374680 ANO2Q9NQ90 1003 aa20.96■□□□□ 0.95
RXRB-201ENST00000374680 DTNBO60941 627 aa20.96■□□□□ 0.95
RXRB-201ENST00000374680 SURF6O75683 361 aaKnown RBP20.96■□□□□ 0.95
RXRB-201ENST00000374680 CHPF2Q9P2E5 772 aa20.96■□□□□ 0.95
RXRB-201ENST00000374680 RABEP1Q15276 862 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 MCTP1Q6DN14 999 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 AK9Q5TCS8 1911 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 KDRP35968 1356 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 KIF24Q5T7B8 1368 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 NEK4P51957 841 aa20.95■□□□□ 0.94
RXRB-201ENST00000374680 ERC2O15083 957 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 GNAI3P08754 354 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 NBPF7P0C2Y1 421 aaPredicted RBP20.94■□□□□ 0.94
RXRB-201ENST00000374680 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
RXRB-201ENST00000374680 GAS2L3Q86XJ1 694 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 MX1P20591 662 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 TEFQ10587 303 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
RXRB-201ENST00000374680 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
RXRB-201ENST00000374680 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
RXRB-201ENST00000374680 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
RXRB-201ENST00000374680 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
RXRB-201ENST00000374680 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
RXRB-201ENST00000374680 LARP6Q9BRS8 491 aaKnown RBP20.92■□□□□ 0.94
RXRB-201ENST00000374680 UPF3BQ9BZI7 483 aaKnown RBP20.92■□□□□ 0.94
RXRB-201ENST00000374680 REC8O95072 547 aa20.92■□□□□ 0.94
RXRB-201ENST00000374680 PALD1Q9ULE6 856 aa20.92■□□□□ 0.94
RXRB-201ENST00000374680 DDX49Q9Y6V7 483 aaKnown RBP20.92■□□□□ 0.94
RXRB-201ENST00000374680 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
RXRB-201ENST00000374680 SRGAP3O43295 1099 aa20.91■□□□□ 0.94
RXRB-201ENST00000374680 ZC3H6P61129 1189 aaKnown RBP20.91■□□□□ 0.94
RXRB-201ENST00000374680 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
RXRB-201ENST00000374680 RRAGDQ9NQL2 400 aaPredicted RBP20.91■□□□□ 0.94
RXRB-201ENST00000374680 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
RXRB-201ENST00000374680 BAG4O95429 457 aaKnown RBP20.9■□□□□ 0.94
RXRB-201ENST00000374680 NRKQ7Z2Y5 1582 aa20.9■□□□□ 0.94
RXRB-201ENST00000374680 ST18O60284 1047 aa20.9■□□□□ 0.94
RXRB-201ENST00000374680 CIZ1Q9ULV3 898 aaPredicted RBP20.9■□□□□ 0.94
RXRB-201ENST00000374680 NCOA3Q9Y6Q9 1424 aa20.9■□□□□ 0.94
RXRB-201ENST00000374680 IP6K1Q92551 441 aa20.89■□□□□ 0.94
RXRB-201ENST00000374680 DDX17Q92841 729 aaKnown RBP20.89■□□□□ 0.94
RXRB-201ENST00000374680 SRCIN1Q9C0H9 1055 aa20.89■□□□□ 0.94
RXRB-201ENST00000374680 IL25Q9H293 177 aa20.89■□□□□ 0.94
RXRB-201ENST00000374680 OS9Q13438 667 aaPredicted RBP20.89■□□□□ 0.93
RXRB-201ENST00000374680 GRPEL1Q9HAV7 217 aa20.89■□□□□ 0.93
RXRB-201ENST00000374680 FSD2A1L4K1 749 aa20.88■□□□□ 0.93
RXRB-201ENST00000374680 HTATSF1O43719 755 aaKnown RBP20.87■□□□□ 0.93
RXRB-201ENST00000374680 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
RXRB-201ENST00000374680 PROSER3Q2NL68 480 aa20.87■□□□□ 0.93
RXRB-201ENST00000374680 GOLGA6L22H0YM25 854 aa20.86■□□□□ 0.93
RXRB-201ENST00000374680 ESYT1Q9BSJ8 1104 aa20.86■□□□□ 0.93
RXRB-201ENST00000374680 GCP02774 474 aa20.86■□□□□ 0.93
RXRB-201ENST00000374680 PRPF40AO75400 957 aaKnown RBP20.85■□□□□ 0.93
RXRB-201ENST00000374680 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
RXRB-201ENST00000374680 CHMLP26374 656 aa20.85■□□□□ 0.93
RXRB-201ENST00000374680 PIP4K2AP48426 406 aaPredicted RBP20.85■□□□□ 0.93
RXRB-201ENST00000374680 AXIN2Q9Y2T1 843 aa20.85■□□□□ 0.93
RXRB-201ENST00000374680 TOPAZ1Q8N9V7 1692 aa20.85■□□□□ 0.93
RXRB-201ENST00000374680 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 PA2G4Q9UQ80 394 aaKnown RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 SLC39A6Q13433 755 aa20.84■□□□□ 0.93
RXRB-201ENST00000374680 CAVIN1Q6NZI2 390 aaKnown RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 DDX54Q8TDD1 881 aaKnown RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 SOS1Q07889 1333 aaPredicted RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 DNAAF4Q8WXU2 420 aa20.84■□□□□ 0.93
RXRB-201ENST00000374680 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
RXRB-201ENST00000374680 C1orf141Q5JVX7 400 aa20.83■□□□□ 0.93
RXRB-201ENST00000374680 ARHGAP23Q9P227 1491 aa20.83■□□□□ 0.92
RXRB-201ENST00000374680 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
RXRB-201ENST00000374680 MRE11P49959 708 aa20.82■□□□□ 0.92
RXRB-201ENST00000374680 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
RXRB-201ENST00000374680 C9orf78Q9NZ63 289 aaPredicted RBP20.82■□□□□ 0.92
RXRB-201ENST00000374680 RBM27Q9P2N5 1060 aaKnown RBP20.82■□□□□ 0.92
RXRB-201ENST00000374680 RHPN1Q8TCX5 695 aa20.82■□□□□ 0.92
RXRB-201ENST00000374680 ANKRD24Q8TF21 1146 aa20.82■□□□□ 0.92
RXRB-201ENST00000374680 OSBPL3Q9H4L5 887 aa20.82■□□□□ 0.92
RXRB-201ENST00000374680 IBTKQ9P2D0 1353 aaPredicted RBP20.81■□□□□ 0.92
RXRB-201ENST00000374680 MAP3K2Q9Y2U5 619 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms