RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CEMIPQ8WUJ3 1361 aa24.48■■□□□ 1.51
CDX4-201ENST00000373514 ERVV-2B6SEH9 535 aa24.48■■□□□ 1.51
CDX4-201ENST00000373514 TMPOP42166 694 aaKnown RBP24.47■■□□□ 1.51
CDX4-201ENST00000373514 CABP4P57796 275 aa24.47■■□□□ 1.51
CDX4-201ENST00000373514 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
CDX4-201ENST00000373514 EZH2Q15910 746 aaKnown RBP24.47■■□□□ 1.51
CDX4-201ENST00000373514 C5P01031 1676 aa24.47■■□□□ 1.51
CDX4-201ENST00000373514 KDM3BQ7LBC6 1761 aa24.47■■□□□ 1.51
CDX4-201ENST00000373514 NFATC2IPQ8NCF5 419 aa24.45■■□□□ 1.51
CDX4-201ENST00000373514 CAMKK2Q96RR4 588 aa24.45■■□□□ 1.51
CDX4-201ENST00000373514 SLC52A2Q9HAB3 445 aa24.45■■□□□ 1.51
CDX4-201ENST00000373514 APAF1O14727 1248 aa24.45■■□□□ 1.5
CDX4-201ENST00000373514 RIPK4P57078 832 aa24.45■■□□□ 1.5
CDX4-201ENST00000373514 TJP1Q07157 1748 aa24.45■■□□□ 1.5
CDX4-201ENST00000373514 THUMPD2Q9BTF0 503 aaKnown RBP24.45■■□□□ 1.5
CDX4-201ENST00000373514 PALLDQ8WX93 1383 aa24.44■■□□□ 1.5
CDX4-201ENST00000373514 RTF1Q92541 710 aaKnown RBP24.44■■□□□ 1.5
CDX4-201ENST00000373514 ASAP1Q9ULH1 1129 aa24.43■■□□□ 1.5
CDX4-201ENST00000373514 TUBGCP6Q96RT7 1819 aa24.43■■□□□ 1.5
CDX4-201ENST00000373514 KCPQ6ZWJ8 1503 aa24.42■■□□□ 1.5
CDX4-201ENST00000373514 COL5A3P25940 1745 aaPredicted RBP24.42■■□□□ 1.5
CDX4-201ENST00000373514 PLSCR1O15162 318 aa24.41■■□□□ 1.5
CDX4-201ENST00000373514 ZNF831Q5JPB2 1677 aa24.41■■□□□ 1.5
CDX4-201ENST00000373514 KCNQ4P56696 695 aa24.4■■□□□ 1.5
CDX4-201ENST00000373514 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
CDX4-201ENST00000373514 ATG3Q9NT62 314 aa24.4■■□□□ 1.5
CDX4-201ENST00000373514 CICQ96RK0 1608 aaPredicted RBP24.4■■□□□ 1.5
CDX4-201ENST00000373514 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
CDX4-201ENST00000373514 TEFQ10587 303 aa24.4■■□□□ 1.5
CDX4-201ENST00000373514 PROM2Q8N271 834 aa24.4■■□□□ 1.5
CDX4-201ENST00000373514 TRIM35Q9UPQ4 493 aa24.4■■□□□ 1.5
CDX4-201ENST00000373514 SLC39A6Q13433 755 aa24.39■■□□□ 1.49
CDX4-201ENST00000373514 TXNRD1Q16881 649 aa24.39■■□□□ 1.49
CDX4-201ENST00000373514 LRRC4BQ9NT99 713 aa24.36■■□□□ 1.49
CDX4-201ENST00000373514 C4BP0C0L5 1744 aa24.36■■□□□ 1.49
CDX4-201ENST00000373514 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
CDX4-201ENST00000373514 SMARCC1Q92922 1105 aaPredicted RBP24.34■■□□□ 1.49
CDX4-201ENST00000373514 CCNL1Q9UK58 526 aaPredicted RBP24.34■■□□□ 1.49
CDX4-201ENST00000373514 LAMB4A4D0S4 1761 aa24.33■■□□□ 1.49
CDX4-201ENST00000373514 KCNQ3O43525 872 aa24.32■■□□□ 1.48
CDX4-201ENST00000373514 SLC4A9Q96Q91 983 aa24.32■■□□□ 1.48
CDX4-201ENST00000373514 RBM42Q9BTD8 480 aaKnown RBP24.32■■□□□ 1.48
CDX4-201ENST00000373514 MIS18AQ9NYP9 233 aa24.32■■□□□ 1.48
CDX4-201ENST00000373514 SALL2Q9Y467 1007 aaPredicted RBP24.32■■□□□ 1.48
CDX4-201ENST00000373514 BTBD11A6QL63 1104 aa24.31■■□□□ 1.48
CDX4-201ENST00000373514 PTCD1O75127 700 aaKnown RBP24.31■■□□□ 1.48
CDX4-201ENST00000373514 LOC102724428A0A0B4J2F2 783 aa24.3■■□□□ 1.48
CDX4-201ENST00000373514 SIK1P57059 783 aa24.3■■□□□ 1.48
CDX4-201ENST00000373514 UBR3Q6ZT12 1888 aa24.3■■□□□ 1.48
CDX4-201ENST00000373514 MYH14Q7Z406 1995 aaKnown RBP24.3■■□□□ 1.48
CDX4-201ENST00000373514 QSER1Q2KHR3 1735 aa24.3■■□□□ 1.48
CDX4-201ENST00000373514 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
CDX4-201ENST00000373514 ZNF790Q6PG37 636 aa24.29■■□□□ 1.48
CDX4-201ENST00000373514 ITPK1Q13572 414 aa24.28■■□□□ 1.48
CDX4-201ENST00000373514 TAF7Q15545 349 aaPredicted RBP24.28■■□□□ 1.48
CDX4-201ENST00000373514 SLC27A3Q5K4L6 730 aa24.28■■□□□ 1.48
CDX4-201ENST00000373514 TTC5Q8N0Z6 440 aa24.28■■□□□ 1.48
CDX4-201ENST00000373514 ATP6V1AP38606 617 aa24.26■■□□□ 1.47
CDX4-201ENST00000373514 ZNF827Q17R98 1081 aa24.26■■□□□ 1.47
CDX4-201ENST00000373514 LINC00116Q8NCU8 138 aa24.25■■□□□ 1.47
CDX4-201ENST00000373514 ZNF496Q96IT1 587 aaPredicted RBP24.25■■□□□ 1.47
CDX4-201ENST00000373514 LAS1LQ9Y4W2 734 aaKnown RBP24.25■■□□□ 1.47
CDX4-201ENST00000373514 CASZ1Q86V15 1759 aa24.24■■□□□ 1.47
CDX4-201ENST00000373514 WWC1Q8IX03 1113 aa24.24■■□□□ 1.47
CDX4-201ENST00000373514 HEG1Q9ULI3 1381 aa24.23■■□□□ 1.47
CDX4-201ENST00000373514 C4AP0C0L4 1744 aa24.23■■□□□ 1.47
CDX4-201ENST00000373514 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
CDX4-201ENST00000373514 TSPYL4Q9UJ04 414 aa24.23■■□□□ 1.47
CDX4-201ENST00000373514 DNAJC10Q8IXB1 793 aa24.21■■□□□ 1.47
CDX4-201ENST00000373514 PRAMEF22A3QJZ6 481 aa24.2■■□□□ 1.47
CDX4-201ENST00000373514 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.47
CDX4-201ENST00000373514 FMNL2Q96PY5 1086 aa24.2■■□□□ 1.47
CDX4-201ENST00000373514 AKT1S1Q96B36 256 aa24.2■■□□□ 1.46
CDX4-201ENST00000373514 R3HDM1Q15032 1099 aaKnown RBP24.19■■□□□ 1.46
CDX4-201ENST00000373514 CHL1O00533 1208 aa24.18■■□□□ 1.46
CDX4-201ENST00000373514 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
CDX4-201ENST00000373514 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
CDX4-201ENST00000373514 MBIPQ9NS73 344 aa24.18■■□□□ 1.46
CDX4-201ENST00000373514 STK32BQ9NY57 414 aa24.18■■□□□ 1.46
CDX4-201ENST00000373514 ZNF853P0CG23 659 aa24.17■■□□□ 1.46
CDX4-201ENST00000373514 SLC15A2Q16348 729 aa24.17■■□□□ 1.46
CDX4-201ENST00000373514 NCBP3Q53F19 620 aaKnown RBP24.17■■□□□ 1.46
CDX4-201ENST00000373514 NBPF14Q5TI25 921 aa24.17■■□□□ 1.46
CDX4-201ENST00000373514 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
CDX4-201ENST00000373514 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
CDX4-201ENST00000373514 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
CDX4-201ENST00000373514 VSIG10Q8N0Z9 540 aa24.16■■□□□ 1.46
CDX4-201ENST00000373514 IFT57Q9NWB7 429 aa24.16■■□□□ 1.46
CDX4-201ENST00000373514 ZNF521Q96K83 1311 aa24.16■■□□□ 1.46
CDX4-201ENST00000373514 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
CDX4-201ENST00000373514 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
CDX4-201ENST00000373514 TSR2Q969E8 191 aaKnown RBP24.15■■□□□ 1.46
CDX4-201ENST00000373514 AK7Q96M32 723 aa24.15■■□□□ 1.46
CDX4-201ENST00000373514 BABAM1Q9NWV8 329 aa24.15■■□□□ 1.46
CDX4-201ENST00000373514 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.45
CDX4-201ENST00000373514 GNAI1P63096 354 aa24.14■■□□□ 1.45
CDX4-201ENST00000373514 SPINK5Q9NQ38 1064 aaPredicted RBP24.14■■□□□ 1.45
CDX4-201ENST00000373514 CNTNAP4Q9C0A0 1308 aa24.14■■□□□ 1.45
CDX4-201ENST00000373514 CYP19A1P11511 503 aaPredicted RBP24.13■■□□□ 1.45
CDX4-201ENST00000373514 PDGFDQ9GZP0 370 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms