RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 ANKIB1Q9P2G1 1089 aa23.75■■□□□ 1.39
SMURF1-202ENST00000361368 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
SMURF1-202ENST00000361368 MAP3K12Q12852 859 aa23.74■■□□□ 1.39
SMURF1-202ENST00000361368 TSG101Q99816 390 aa23.74■■□□□ 1.39
SMURF1-202ENST00000361368 RAPGEF3O95398 923 aa23.74■■□□□ 1.39
SMURF1-202ENST00000361368 CCDC85AQ96PX6 553 aaPredicted RBP23.74■■□□□ 1.39
SMURF1-202ENST00000361368 SPINK5Q9NQ38 1064 aaPredicted RBP23.74■■□□□ 1.39
SMURF1-202ENST00000361368 SSR1P43307 286 aaKnown RBP23.74■■□□□ 1.39
SMURF1-202ENST00000361368 KIAA1328Q86T90 577 aa23.73■■□□□ 1.39
SMURF1-202ENST00000361368 TAX1BP1Q86VP1 789 aa23.73■■□□□ 1.39
SMURF1-202ENST00000361368 CTCFLQ8NI51 663 aaPredicted RBP23.73■■□□□ 1.39
SMURF1-202ENST00000361368 SLC5A1P13866 664 aa23.73■■□□□ 1.39
SMURF1-202ENST00000361368 NAPBQ9H115 298 aa23.73■■□□□ 1.39
SMURF1-202ENST00000361368 PIBF1Q8WXW3 757 aa23.72■■□□□ 1.39
SMURF1-202ENST00000361368 KIF20AO95235 890 aa23.72■■□□□ 1.39
SMURF1-202ENST00000361368 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
SMURF1-202ENST00000361368 IFIT5Q13325 482 aaKnown RBP23.71■■□□□ 1.39
SMURF1-202ENST00000361368 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
SMURF1-202ENST00000361368 ZNF444Q8N0Y2 327 aaPredicted RBP23.71■■□□□ 1.39
SMURF1-202ENST00000361368 RNF41Q9H4P4 317 aaPredicted RBP23.71■■□□□ 1.39
SMURF1-202ENST00000361368 HMGB1P09429 215 aaKnown RBP23.7■■□□□ 1.39
SMURF1-202ENST00000361368 FGFR1OPO95684 399 aaKnown RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 CASTP20810 708 aaKnown RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 TMEM266Q2M3C6 531 aa23.7■■□□□ 1.38
SMURF1-202ENST00000361368 CCDC97Q96F63 343 aaPredicted RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 FKBP15Q5T1M5 1219 aa23.7■■□□□ 1.38
SMURF1-202ENST00000361368 IQCA1Q86XH1 822 aa23.7■■□□□ 1.38
SMURF1-202ENST00000361368 MINDY4BA8MYZ0 360 aa23.7■■□□□ 1.38
SMURF1-202ENST00000361368 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 VPS36Q86VN1 386 aa23.7■■□□□ 1.38
SMURF1-202ENST00000361368 TMPOP42166 694 aaKnown RBP23.7■■□□□ 1.38
SMURF1-202ENST00000361368 CCDC148Q8NFR7 591 aa23.69■■□□□ 1.38
SMURF1-202ENST00000361368 ARHGAP29Q52LW3 1261 aa23.69■■□□□ 1.38
SMURF1-202ENST00000361368 CCDC150Q8NCX0 1101 aa23.69■■□□□ 1.38
SMURF1-202ENST00000361368 LRRFIP2Q9Y608 721 aaKnown RBP23.69■■□□□ 1.38
SMURF1-202ENST00000361368 CENPHQ9H3R5 247 aa23.69■■□□□ 1.38
SMURF1-202ENST00000361368 NUTM1Q86Y26 1132 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 IBSPP21815 317 aaPredicted RBP23.68■■□□□ 1.38
SMURF1-202ENST00000361368 MYD88Q99836 296 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 NSD3Q9BZ95 1437 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 MX1P20591 662 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 SPA17Q15506 151 aa23.68■■□□□ 1.38
SMURF1-202ENST00000361368 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
SMURF1-202ENST00000361368 TTLL12Q14166 644 aaPredicted RBP23.67■■□□□ 1.38
SMURF1-202ENST00000361368 CCDC96Q2M329 555 aa23.67■■□□□ 1.38
SMURF1-202ENST00000361368 ANKRD18BA2A2Z9 1011 aa23.67■■□□□ 1.38
SMURF1-202ENST00000361368 MAP3K11Q16584 847 aa23.67■■□□□ 1.38
SMURF1-202ENST00000361368 FAM177A1Q8N128 213 aaPredicted RBP23.67■■□□□ 1.38
SMURF1-202ENST00000361368 TRMT112Q9UI30 125 aaKnown RBP23.67■■□□□ 1.38
SMURF1-202ENST00000361368 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
SMURF1-202ENST00000361368 ANAPC15P60006 121 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 CCDC91Q7Z6B0 441 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 CFAP100Q494V2 611 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 DDX11Q96FC9 970 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 HYPKQ9NX55 129 aa23.65■■□□□ 1.38
SMURF1-202ENST00000361368 ALDH1L2Q3SY69 923 aa23.64■■□□□ 1.38
SMURF1-202ENST00000361368 LDHCP07864 332 aa23.64■■□□□ 1.38
SMURF1-202ENST00000361368 SH2B1Q9NRF2 756 aaPredicted RBP23.64■■□□□ 1.38
SMURF1-202ENST00000361368 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.37
SMURF1-202ENST00000361368 TMEM87AQ8NBN3 555 aa23.63■■□□□ 1.37
SMURF1-202ENST00000361368 EXOC6BQ9Y2D4 811 aa23.63■■□□□ 1.37
SMURF1-202ENST00000361368 BAG4O95429 457 aaKnown RBP23.63■■□□□ 1.37
SMURF1-202ENST00000361368 SLC12A7Q9Y666 1083 aa23.63■■□□□ 1.37
SMURF1-202ENST00000361368 CCDC12Q8WUD4 166 aaPredicted RBP23.62■■□□□ 1.37
SMURF1-202ENST00000361368 GBP3Q9H0R5 595 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 EXOC5O00471 708 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 TMEM57Q8N5G2 664 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 KIF2AO00139 706 aaPredicted RBP23.62■■□□□ 1.37
SMURF1-202ENST00000361368 RANBP6O60518 1105 aaKnown RBP23.62■■□□□ 1.37
SMURF1-202ENST00000361368 WDR78Q5VTH9 848 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 CACNA2D4Q7Z3S7 1137 aa23.62■■□□□ 1.37
SMURF1-202ENST00000361368 SCAND2PQ9GZW5 306 aaPredicted RBP23.62■■□□□ 1.37
SMURF1-202ENST00000361368 CCDC194A0A1B0GVG4 234 aa23.61■■□□□ 1.37
SMURF1-202ENST00000361368 ZNF213O14771 459 aa23.61■■□□□ 1.37
SMURF1-202ENST00000361368 FILIP1Q7Z7B0 1213 aa23.61■■□□□ 1.37
SMURF1-202ENST00000361368 PRPF40BQ6NWY9 871 aaKnown RBP23.61■■□□□ 1.37
SMURF1-202ENST00000361368 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
SMURF1-202ENST00000361368 C8orf76Q96K31 380 aa23.61■■□□□ 1.37
SMURF1-202ENST00000361368 CHMP4BP1P59074 171 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 MCM10Q7L590 875 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 CCDC141Q6ZP82 1450 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 NGLY1Q96IV0 654 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 ANO10Q9NW15 660 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
SMURF1-202ENST00000361368 TTF1Q15361 905 aaPredicted RBP23.6■■□□□ 1.37
SMURF1-202ENST00000361368 A0A087WZG4 1122 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 ZSCAN12O43309 604 aa23.6■■□□□ 1.37
SMURF1-202ENST00000361368 PAXIP1Q6ZW49 1069 aaPredicted RBP23.6■■□□□ 1.37
SMURF1-202ENST00000361368 CETN1Q12798 172 aa23.59■■□□□ 1.37
SMURF1-202ENST00000361368 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
SMURF1-202ENST00000361368 CATIPQ7Z7H3 387 aa23.59■■□□□ 1.37
SMURF1-202ENST00000361368 PLCD4Q9BRC7 762 aa23.59■■□□□ 1.37
SMURF1-202ENST00000361368 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
SMURF1-202ENST00000361368 BOLA2Q9H3K6 86 aa23.59■■□□□ 1.37
SMURF1-202ENST00000361368 GRPEL1Q9HAV7 217 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms