RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SMC2O95347 1197 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 ME1P48163 572 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 PDE4CQ08493 712 aa17.37■□□□□ 0.37
SLC6A20-202ENST00000358525 PDILTQ8N807 584 aa17.37■□□□□ 0.37
SLC6A20-202ENST00000358525 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
SLC6A20-202ENST00000358525 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 MEIS3Q99687 375 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 A0A1W2PP64 1363 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 TNRQ92752 1358 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 ESPNB1AK53 854 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 KRT32Q14532 448 aa17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
SLC6A20-202ENST00000358525 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
SLC6A20-202ENST00000358525 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
SLC6A20-202ENST00000358525 DDX11Q96FC9 970 aa17.35■□□□□ 0.37
SLC6A20-202ENST00000358525 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
SLC6A20-202ENST00000358525 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
SLC6A20-202ENST00000358525 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
SLC6A20-202ENST00000358525 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
SLC6A20-202ENST00000358525 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
SLC6A20-202ENST00000358525 MAP3K2Q9Y2U5 619 aa17.33■□□□□ 0.37
SLC6A20-202ENST00000358525 MNS1Q8NEH6 495 aa17.33■□□□□ 0.36
SLC6A20-202ENST00000358525 PPP1R42Q7Z4L9 355 aa17.33■□□□□ 0.36
SLC6A20-202ENST00000358525 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
SLC6A20-202ENST00000358525 NUP62CLQ9H1M0 184 aa17.33■□□□□ 0.36
SLC6A20-202ENST00000358525 ANXA1P04083 346 aa17.33■□□□□ 0.36
SLC6A20-202ENST00000358525 PI4KAP2A4QPH2 592 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 PI4KAP1Q8N8J0 262 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 SDSP20132 328 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 KDM6BO15054 1643 aa17.32■□□□□ 0.36
SLC6A20-202ENST00000358525 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 ABCC1P33527 1531 aa17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
SLC6A20-202ENST00000358525 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 VAMP4O75379 141 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 CFAP45Q9UL16 551 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 CAMK4Q16566 473 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 GPS2Q13227 327 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
SLC6A20-202ENST00000358525 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 SEC24BO95487 1268 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 TRIM22Q8IYM9 498 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 NCKAP5LQ9HCH0 1330 aa17.29■□□□□ 0.36
SLC6A20-202ENST00000358525 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 TNNT3P45378 269 aaPredicted RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 BAG4O95429 457 aaKnown RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 SLC3A2P08195 630 aaKnown RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
SLC6A20-202ENST00000358525 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
SLC6A20-202ENST00000358525 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
SLC6A20-202ENST00000358525 KRT28Q7Z3Y7 464 aa17.27■□□□□ 0.36
SLC6A20-202ENST00000358525 NPATQ14207 1427 aa17.27■□□□□ 0.36
SLC6A20-202ENST00000358525 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.36
SLC6A20-202ENST00000358525 A0A087WZG4 1122 aa17.27■□□□□ 0.35
SLC6A20-202ENST00000358525 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.35
SLC6A20-202ENST00000358525 MAP3K11Q16584 847 aa17.27■□□□□ 0.35
SLC6A20-202ENST00000358525 ANKRD24Q8TF21 1146 aa17.27■□□□□ 0.35
SLC6A20-202ENST00000358525 STARD3NLO95772 234 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 CHPF2Q9P2E5 772 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 TDO2P48775 406 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 EVI5LQ96CN4 794 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms