RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 REC8O95072 547 aa25.09■■□□□ 1.61
COL13A1-202ENST00000357811 ABTB2Q8N961 1025 aa25.09■■□□□ 1.61
COL13A1-202ENST00000357811 IL17REQ8NFR9 667 aa25.09■■□□□ 1.61
COL13A1-202ENST00000357811 ERBB4Q15303 1308 aa25.09■■□□□ 1.61
COL13A1-202ENST00000357811 SKOR2Q2VWA4 1001 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-202ENST00000357811 NAP1L5Q96NT1 182 aaPredicted RBP25.08■■□□□ 1.61
COL13A1-202ENST00000357811 PHAXQ9H814 394 aaKnown RBP25.08■■□□□ 1.61
COL13A1-202ENST00000357811 ANO2Q9NQ90 1003 aa25.08■■□□□ 1.61
COL13A1-202ENST00000357811 USP31Q70CQ4 1352 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 GNAT3A8MTJ3 354 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 PRPF40AO75400 957 aaKnown RBP25.07■■□□□ 1.6
COL13A1-202ENST00000357811 TPRNQ4KMQ1 711 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 TRIM44Q96DX7 344 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-202ENST00000357811 LRRCC1Q9C099 1032 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 PALD1Q9ULE6 856 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 UNC5CLQ8IV45 518 aa25.07■■□□□ 1.6
COL13A1-202ENST00000357811 ANXA1P04083 346 aa25.06■■□□□ 1.6
COL13A1-202ENST00000357811 NUTM1Q86Y26 1132 aa25.06■■□□□ 1.6
COL13A1-202ENST00000357811 RBM27Q9P2N5 1060 aaKnown RBP25.06■■□□□ 1.6
COL13A1-202ENST00000357811 SBNO1A3KN83 1393 aa25.06■■□□□ 1.6
COL13A1-202ENST00000357811 ARHGEF10O15013 1369 aa25.06■■□□□ 1.6
COL13A1-202ENST00000357811 CCDC30Q5VVM6 783 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 MX1P20591 662 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 UPF3BQ9BZI7 483 aaKnown RBP25.05■■□□□ 1.6
COL13A1-202ENST00000357811 NRKQ7Z2Y5 1582 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 HOXC9P31274 260 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 PKNOX2Q96KN3 472 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
COL13A1-202ENST00000357811 KCNA6P17658 529 aa25.04■■□□□ 1.6
COL13A1-202ENST00000357811 PLEKHG1Q9ULL1 1385 aa25.04■■□□□ 1.6
COL13A1-202ENST00000357811 NUCB2P80303 420 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 ZDHHC9Q9Y397 364 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 DTNBO60941 627 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 HDGFL1Q5TGJ6 251 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 TTC21AQ8NDW8 1320 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 UBR1Q8IWV7 1749 aa25.02■■□□□ 1.6
COL13A1-202ENST00000357811 NASPP49321 788 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-202ENST00000357811 IL25Q9H293 177 aa25.01■■□□□ 1.59
COL13A1-202ENST00000357811 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
COL13A1-202ENST00000357811 ESPNB1AK53 854 aa25.01■■□□□ 1.59
COL13A1-202ENST00000357811 KLHL40Q2TBA0 621 aa25.01■■□□□ 1.59
COL13A1-202ENST00000357811 SSH2Q76I76 1423 aa25.01■■□□□ 1.59
COL13A1-202ENST00000357811 ESYT1Q9BSJ8 1104 aa25■■□□□ 1.59
COL13A1-202ENST00000357811 USP44Q9H0E7 712 aa25■■□□□ 1.59
COL13A1-202ENST00000357811 TMX3Q96JJ7 454 aa25■■□□□ 1.59
COL13A1-202ENST00000357811 LARP6Q9BRS8 491 aaKnown RBP25■■□□□ 1.59
COL13A1-202ENST00000357811 LMBRD1Q9NUN5 540 aa25■■□□□ 1.59
COL13A1-202ENST00000357811 GNAI3P08754 354 aa24.99■■□□□ 1.59
COL13A1-202ENST00000357811 UBTFL1P0CB47 393 aaPredicted RBP24.99■■□□□ 1.59
COL13A1-202ENST00000357811 ATP8B2P98198 1209 aa24.99■■□□□ 1.59
COL13A1-202ENST00000357811 SURF6O75683 361 aaKnown RBP24.98■■□□□ 1.59
COL13A1-202ENST00000357811 LGR6Q9HBX8 967 aa24.98■■□□□ 1.59
COL13A1-202ENST00000357811 RGPD8O14715 1765 aaPredicted RBP24.98■■□□□ 1.59
COL13A1-202ENST00000357811 KCNQ3O43525 872 aa24.98■■□□□ 1.59
COL13A1-202ENST00000357811 TAF7Q15545 349 aaPredicted RBP24.98■■□□□ 1.59
COL13A1-202ENST00000357811 NSFL1CQ9UNZ2 370 aaKnown RBP24.98■■□□□ 1.59
COL13A1-202ENST00000357811 KDRP35968 1356 aa24.98■■□□□ 1.59
COL13A1-202ENST00000357811 CYP2E1P05181 493 aaPredicted RBP24.97■■□□□ 1.59
COL13A1-202ENST00000357811 CHMLP26374 656 aa24.96■■□□□ 1.59
COL13A1-202ENST00000357811 CLCN1P35523 988 aa24.96■■□□□ 1.59
COL13A1-202ENST00000357811 ZSCAN23Q3MJ62 389 aa24.96■■□□□ 1.59
COL13A1-202ENST00000357811 OSBPL3Q9H4L5 887 aa24.96■■□□□ 1.59
COL13A1-202ENST00000357811 XPCQ01831 940 aaPredicted RBP24.95■■□□□ 1.58
COL13A1-202ENST00000357811 PPP1R42Q7Z4L9 355 aa24.95■■□□□ 1.58
COL13A1-202ENST00000357811 GPT2Q8TD30 523 aa24.95■■□□□ 1.58
COL13A1-202ENST00000357811 NBPF7P0C2Y1 421 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-202ENST00000357811 PTMSP20962 102 aa24.94■■□□□ 1.58
COL13A1-202ENST00000357811 TBX22Q9Y458 520 aa24.94■■□□□ 1.58
COL13A1-202ENST00000357811 RGPD1P0DJD0 1748 aa24.94■■□□□ 1.58
COL13A1-202ENST00000357811 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
COL13A1-202ENST00000357811 GDPD2Q9HCC8 539 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 LMOD2Q6P5Q4 547 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 CHPF2Q9P2E5 772 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 SRGAP3O43295 1099 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 PRIM1P49642 420 aaKnown RBP24.93■■□□□ 1.58
COL13A1-202ENST00000357811 CWC22Q9HCG8 908 aaKnown RBP24.93■■□□□ 1.58
COL13A1-202ENST00000357811 ISY1Q9ULR0 285 aaKnown RBP24.93■■□□□ 1.58
COL13A1-202ENST00000357811 SALL3Q9BXA9 1300 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
COL13A1-202ENST00000357811 CLEC17AQ6ZS10 378 aa24.92■■□□□ 1.58
COL13A1-202ENST00000357811 IBTKQ9P2D0 1353 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-202ENST00000357811 NBPF6Q5VWK0 638 aa24.91■■□□□ 1.58
COL13A1-202ENST00000357811 NBPF4Q96M43 638 aa24.91■■□□□ 1.58
COL13A1-202ENST00000357811 MPRIPQ6WCQ1 1025 aa24.91■■□□□ 1.58
COL13A1-202ENST00000357811 RBSNQ9H1K0 784 aa24.91■■□□□ 1.58
COL13A1-202ENST00000357811 PI4KAP2A4QPH2 592 aa24.9■■□□□ 1.58
COL13A1-202ENST00000357811 PI4KAP1Q8N8J0 262 aa24.9■■□□□ 1.58
COL13A1-202ENST00000357811 TOPAZ1Q8N9V7 1692 aa24.9■■□□□ 1.58
COL13A1-202ENST00000357811 ANP32BQ92688 251 aaKnown RBP24.9■■□□□ 1.58
COL13A1-202ENST00000357811 SYCE3A1L190 88 aa24.9■■□□□ 1.58
COL13A1-202ENST00000357811 MCCP23508 829 aa24.89■■□□□ 1.58
COL13A1-202ENST00000357811 VSIG10Q8N0Z9 540 aa24.89■■□□□ 1.58
COL13A1-202ENST00000357811 RNF214Q8ND24 703 aa24.89■■□□□ 1.58
COL13A1-202ENST00000357811 SRCIN1Q9C0H9 1055 aa24.89■■□□□ 1.57
COL13A1-202ENST00000357811 TMEM63CQ9P1W3 806 aa24.88■■□□□ 1.57
COL13A1-202ENST00000357811 GLIPR1L2Q4G1C9 344 aa24.88■■□□□ 1.57
COL13A1-202ENST00000357811 THEMISQ8N1K5 641 aaPredicted RBP24.88■■□□□ 1.57
COL13A1-202ENST00000357811 NALCNQ8IZF0 1738 aa24.88■■□□□ 1.57
COL13A1-202ENST00000357811 SOS1Q07889 1333 aaPredicted RBP24.88■■□□□ 1.57
COL13A1-202ENST00000357811 DIP2AQ14689 1571 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms