RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 REC8O95072 547 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 KCNA6P17658 529 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 HOXC9P31274 260 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 ERC2O15083 957 aa24.03■■□□□ 1.44
COL13A1-201ENST00000354547 LRRFIP2Q9Y608 721 aaKnown RBP24.03■■□□□ 1.44
COL13A1-201ENST00000354547 EIF2S2P20042 333 aaKnown RBP24.02■■□□□ 1.44
COL13A1-201ENST00000354547 ST18O60284 1047 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 CHAMP1Q96JM3 812 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
COL13A1-201ENST00000354547 SKOR2Q2VWA4 1001 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-201ENST00000354547 LRRCC1Q9C099 1032 aa24.01■■□□□ 1.43
COL13A1-201ENST00000354547 RGPD8O14715 1765 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-201ENST00000354547 KIF13AQ9H1H9 1805 aa24.01■■□□□ 1.43
COL13A1-201ENST00000354547 IL1RAPL2Q9NP60 686 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
COL13A1-201ENST00000354547 TOPAZ1Q8N9V7 1692 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 KDRP35968 1356 aa24■■□□□ 1.43
COL13A1-201ENST00000354547 NEK4P51957 841 aa23.99■■□□□ 1.43
COL13A1-201ENST00000354547 RGPD1P0DJD0 1748 aa23.99■■□□□ 1.43
COL13A1-201ENST00000354547 GNAI3P08754 354 aa23.98■■□□□ 1.43
COL13A1-201ENST00000354547 MX1P20591 662 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 HDGFL1Q5TGJ6 251 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 ANO2Q9NQ90 1003 aa23.97■■□□□ 1.43
COL13A1-201ENST00000354547 MAP4K4O95819 1239 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-201ENST00000354547 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
COL13A1-201ENST00000354547 SETD1BQ9UPS6 1966 aaKnown RBP23.96■■□□□ 1.43
COL13A1-201ENST00000354547 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
COL13A1-201ENST00000354547 NUTM1Q86Y26 1132 aa23.95■■□□□ 1.42
COL13A1-201ENST00000354547 ANXA1P04083 346 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 UBTFL1P0CB47 393 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-201ENST00000354547 NUCB2P80303 420 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 DIP2AQ14689 1571 aa23.94■■□□□ 1.42
COL13A1-201ENST00000354547 CAVIN1Q6NZI2 390 aaKnown RBP23.94■■□□□ 1.42
COL13A1-201ENST00000354547 PALD1Q9ULE6 856 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 OSBPL3Q9H4L5 887 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 MAP3K5Q99683 1374 aa23.93■■□□□ 1.42
COL13A1-201ENST00000354547 PRPF40AO75400 957 aaKnown RBP23.92■■□□□ 1.42
COL13A1-201ENST00000354547 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 LGR6Q9HBX8 967 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 PTMSP20962 102 aa23.92■■□□□ 1.42
COL13A1-201ENST00000354547 TRIM44Q96DX7 344 aaPredicted RBP23.92■■□□□ 1.42
COL13A1-201ENST00000354547 FMN2Q9NZ56 1722 aa23.91■■□□□ 1.42
COL13A1-201ENST00000354547 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 FOXD4L6Q3SYB3 417 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 FOXD4L3Q6VB84 417 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-201ENST00000354547 SURF6O75683 361 aaKnown RBP23.9■■□□□ 1.42
COL13A1-201ENST00000354547 UPF3BQ9BZI7 483 aaKnown RBP23.9■■□□□ 1.42
COL13A1-201ENST00000354547 KCNQ3O43525 872 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 KLHL40Q2TBA0 621 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 PIK3C2AO00443 1686 aa23.9■■□□□ 1.42
COL13A1-201ENST00000354547 CHMLP26374 656 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 TMX3Q96JJ7 454 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 ZDHHC9Q9Y397 364 aa23.89■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF6Q5VWK0 638 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF4Q96M43 638 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 XPCQ01831 940 aaPredicted RBP23.88■■□□□ 1.41
COL13A1-201ENST00000354547 LMBRD1Q9NUN5 540 aa23.88■■□□□ 1.41
COL13A1-201ENST00000354547 CWC22Q9HCG8 908 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 RBM27Q9P2N5 1060 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 IBTKQ9P2D0 1353 aaPredicted RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 ISY1Q9ULR0 285 aaKnown RBP23.87■■□□□ 1.41
COL13A1-201ENST00000354547 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 SALL3Q9BXA9 1300 aa23.87■■□□□ 1.41
COL13A1-201ENST00000354547 CYP2E1P05181 493 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 IL25Q9H293 177 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NBPF7P0C2Y1 421 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 CLEC17AQ6ZS10 378 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 ERBB4Q15303 1308 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 SRGAP3O43295 1099 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 MCCP23508 829 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NASPP49321 788 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 NAP1L5Q96NT1 182 aaPredicted RBP23.86■■□□□ 1.41
COL13A1-201ENST00000354547 SRCIN1Q9C0H9 1055 aa23.86■■□□□ 1.41
COL13A1-201ENST00000354547 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
COL13A1-201ENST00000354547 PI4KAP2A4QPH2 592 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 PSME1Q06323 249 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 PI4KAP1Q8N8J0 262 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
COL13A1-201ENST00000354547 ESPNB1AK53 854 aa23.83■■□□□ 1.41
COL13A1-201ENST00000354547 ZSCAN23Q3MJ62 389 aa23.82■■□□□ 1.4
COL13A1-201ENST00000354547 TEFQ10587 303 aa23.82■■□□□ 1.4
COL13A1-201ENST00000354547 LARP6Q9BRS8 491 aaKnown RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 SOS1Q07889 1333 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 OS9Q13438 667 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 EIF4A1P60842 406 aaKnown RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-201ENST00000354547 GPT2Q8TD30 523 aa23.81■■□□□ 1.4
COL13A1-201ENST00000354547 ARHGAP23Q9P227 1491 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 CLCN1P35523 988 aa23.8■■□□□ 1.4
COL13A1-201ENST00000354547 NSFL1CQ9UNZ2 370 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms