RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 HOXC9P31274 260 aa23.5■■□□□ 1.35
LYSMD4-202ENST00000344791 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
LYSMD4-202ENST00000344791 BAG4O95429 457 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-202ENST00000344791 PHAXQ9H814 394 aaKnown RBP23.5■■□□□ 1.35
LYSMD4-202ENST00000344791 GOLGA6L22H0YM25 854 aa23.49■■□□□ 1.35
LYSMD4-202ENST00000344791 ERC2O15083 957 aa23.49■■□□□ 1.35
LYSMD4-202ENST00000344791 CCDC30Q5VVM6 783 aa23.49■■□□□ 1.35
LYSMD4-202ENST00000344791 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
LYSMD4-202ENST00000344791 MAP4K4O95819 1239 aaPredicted RBP23.48■■□□□ 1.35
LYSMD4-202ENST00000344791 REC8O95072 547 aa23.48■■□□□ 1.35
LYSMD4-202ENST00000344791 LRRCC1Q9C099 1032 aa23.48■■□□□ 1.35
LYSMD4-202ENST00000344791 RGPD8O14715 1765 aaPredicted RBP23.47■■□□□ 1.35
LYSMD4-202ENST00000344791 ST18O60284 1047 aa23.47■■□□□ 1.35
LYSMD4-202ENST00000344791 ANXA1P04083 346 aa23.46■■□□□ 1.35
LYSMD4-202ENST00000344791 NEK4P51957 841 aa23.46■■□□□ 1.35
LYSMD4-202ENST00000344791 KIF13AQ9H1H9 1805 aa23.46■■□□□ 1.35
LYSMD4-202ENST00000344791 HDGFL1Q5TGJ6 251 aa23.46■■□□□ 1.35
LYSMD4-202ENST00000344791 ANO2Q9NQ90 1003 aa23.46■■□□□ 1.35
LYSMD4-202ENST00000344791 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
LYSMD4-202ENST00000344791 MX1P20591 662 aa23.45■■□□□ 1.34
LYSMD4-202ENST00000344791 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.34
LYSMD4-202ENST00000344791 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.34
LYSMD4-202ENST00000344791 KDRP35968 1356 aa23.44■■□□□ 1.34
LYSMD4-202ENST00000344791 NUTM1Q86Y26 1132 aa23.44■■□□□ 1.34
LYSMD4-202ENST00000344791 TOPAZ1Q8N9V7 1692 aa23.44■■□□□ 1.34
LYSMD4-202ENST00000344791 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
LYSMD4-202ENST00000344791 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
LYSMD4-202ENST00000344791 SKOR2Q2VWA4 1001 aaPredicted RBP23.43■■□□□ 1.34
LYSMD4-202ENST00000344791 CAVIN1Q6NZI2 390 aaKnown RBP23.43■■□□□ 1.34
LYSMD4-202ENST00000344791 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
LYSMD4-202ENST00000344791 GNAI3P08754 354 aa23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 TAF7Q15545 349 aaPredicted RBP23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 PALD1Q9ULE6 856 aa23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 UBTFL1P0CB47 393 aaPredicted RBP23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 XPCQ01831 940 aaPredicted RBP23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 THEMISQ8N1K5 641 aaPredicted RBP23.42■■□□□ 1.34
LYSMD4-202ENST00000344791 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
LYSMD4-202ENST00000344791 LGR6Q9HBX8 967 aa23.41■■□□□ 1.34
LYSMD4-202ENST00000344791 UPF3BQ9BZI7 483 aaKnown RBP23.41■■□□□ 1.34
LYSMD4-202ENST00000344791 USP44Q9H0E7 712 aa23.41■■□□□ 1.34
LYSMD4-202ENST00000344791 DIP2AQ14689 1571 aa23.4■■□□□ 1.34
LYSMD4-202ENST00000344791 PRPF40AO75400 957 aaKnown RBP23.4■■□□□ 1.34
LYSMD4-202ENST00000344791 TPRNQ4KMQ1 711 aa23.4■■□□□ 1.34
LYSMD4-202ENST00000344791 KCNQ3O43525 872 aa23.4■■□□□ 1.34
LYSMD4-202ENST00000344791 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
LYSMD4-202ENST00000344791 MAP3K5Q99683 1374 aa23.39■■□□□ 1.34
LYSMD4-202ENST00000344791 ATP8B2P98198 1209 aa23.39■■□□□ 1.34
LYSMD4-202ENST00000344791 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.34
LYSMD4-202ENST00000344791 TRIM44Q96DX7 344 aaPredicted RBP23.39■■□□□ 1.33
LYSMD4-202ENST00000344791 SURF6O75683 361 aaKnown RBP23.38■■□□□ 1.33
LYSMD4-202ENST00000344791 NUCB2P80303 420 aa23.38■■□□□ 1.33
LYSMD4-202ENST00000344791 ESYT1Q9BSJ8 1104 aa23.38■■□□□ 1.33
LYSMD4-202ENST00000344791 RBM27Q9P2N5 1060 aaKnown RBP23.38■■□□□ 1.33
LYSMD4-202ENST00000344791 IL25Q9H293 177 aa23.37■■□□□ 1.33
LYSMD4-202ENST00000344791 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
LYSMD4-202ENST00000344791 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
LYSMD4-202ENST00000344791 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
LYSMD4-202ENST00000344791 PPP1R42Q7Z4L9 355 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 OSBPL3Q9H4L5 887 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 NBPF7P0C2Y1 421 aaPredicted RBP23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 MPRIPQ6WCQ1 1025 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 ZDHHC9Q9Y397 364 aa23.36■■□□□ 1.33
LYSMD4-202ENST00000344791 KLHL40Q2TBA0 621 aa23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 ESCO1Q5FWF5 840 aa23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 TMX3Q96JJ7 454 aa23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 CHMLP26374 656 aa23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 NAP1L5Q96NT1 182 aaPredicted RBP23.35■■□□□ 1.33
LYSMD4-202ENST00000344791 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
LYSMD4-202ENST00000344791 LARP6Q9BRS8 491 aaKnown RBP23.34■■□□□ 1.33
LYSMD4-202ENST00000344791 DTNBO60941 627 aa23.34■■□□□ 1.33
LYSMD4-202ENST00000344791 NASPP49321 788 aaPredicted RBP23.34■■□□□ 1.33
LYSMD4-202ENST00000344791 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
LYSMD4-202ENST00000344791 IBTKQ9P2D0 1353 aaPredicted RBP23.33■■□□□ 1.33
LYSMD4-202ENST00000344791 PI4KAP2A4QPH2 592 aa23.33■■□□□ 1.33
LYSMD4-202ENST00000344791 PI4KAP1Q8N8J0 262 aa23.33■■□□□ 1.33
LYSMD4-202ENST00000344791 LMBRD1Q9NUN5 540 aa23.33■■□□□ 1.33
LYSMD4-202ENST00000344791 HTATSF1O43719 755 aaKnown RBP23.33■■□□□ 1.32
LYSMD4-202ENST00000344791 PSME1Q06323 249 aa23.33■■□□□ 1.32
LYSMD4-202ENST00000344791 SRCIN1Q9C0H9 1055 aa23.33■■□□□ 1.32
LYSMD4-202ENST00000344791 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.32
LYSMD4-202ENST00000344791 PTMSP20962 102 aa23.32■■□□□ 1.32
LYSMD4-202ENST00000344791 CYP2E1P05181 493 aaPredicted RBP23.31■■□□□ 1.32
LYSMD4-202ENST00000344791 MCCP23508 829 aa23.31■■□□□ 1.32
LYSMD4-202ENST00000344791 TEFQ10587 303 aa23.3■■□□□ 1.32
LYSMD4-202ENST00000344791 OS9Q13438 667 aaPredicted RBP23.3■■□□□ 1.32
LYSMD4-202ENST00000344791 CWC22Q9HCG8 908 aaKnown RBP23.3■■□□□ 1.32
LYSMD4-202ENST00000344791 NSFL1CQ9UNZ2 370 aaKnown RBP23.3■■□□□ 1.32
LYSMD4-202ENST00000344791 ESPNB1AK53 854 aa23.3■■□□□ 1.32
LYSMD4-202ENST00000344791 ZSCAN23Q3MJ62 389 aa23.29■■□□□ 1.32
LYSMD4-202ENST00000344791 SOS1Q07889 1333 aaPredicted RBP23.29■■□□□ 1.32
LYSMD4-202ENST00000344791 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
LYSMD4-202ENST00000344791 GPT2Q8TD30 523 aa23.28■■□□□ 1.32
LYSMD4-202ENST00000344791 BTBD11A6QL63 1104 aa23.28■■□□□ 1.32
LYSMD4-202ENST00000344791 ISY1Q9ULR0 285 aaKnown RBP23.28■■□□□ 1.32
LYSMD4-202ENST00000344791 RHPN1Q8TCX5 695 aa23.27■■□□□ 1.32
LYSMD4-202ENST00000344791 GDPD2Q9HCC8 539 aa23.27■■□□□ 1.32
LYSMD4-202ENST00000344791 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms