RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
NLRP3-201ENST00000336119 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
NLRP3-201ENST00000336119 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
NLRP3-201ENST00000336119 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
NLRP3-201ENST00000336119 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
NLRP3-201ENST00000336119 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
NLRP3-201ENST00000336119 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 EVA1CP58658 441 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 ZC3H13Q5T200 1668 aaKnown RBP11.22□□□□□ -0.61
NLRP3-201ENST00000336119 ZC3H6P61129 1189 aaKnown RBP11.22□□□□□ -0.61
NLRP3-201ENST00000336119 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
NLRP3-201ENST00000336119 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
NLRP3-201ENST00000336119 ZRSR1Q15695 479 aaKnown RBP11.22□□□□□ -0.61
NLRP3-201ENST00000336119 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 PPLO60437 1756 aa11.22□□□□□ -0.61
NLRP3-201ENST00000336119 ARHGEF10O15013 1369 aa11.21□□□□□ -0.61
NLRP3-201ENST00000336119 SDSP20132 328 aa11.21□□□□□ -0.61
NLRP3-201ENST00000336119 BABAM1Q9NWV8 329 aa11.21□□□□□ -0.61
NLRP3-201ENST00000336119 HIP1O00291 1037 aa11.21□□□□□ -0.61
NLRP3-201ENST00000336119 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
NLRP3-201ENST00000336119 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
NLRP3-201ENST00000336119 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.62
NLRP3-201ENST00000336119 MSH6P52701 1360 aa11.21□□□□□ -0.62
NLRP3-201ENST00000336119 ATP8B2P98198 1209 aa11.21□□□□□ -0.62
NLRP3-201ENST00000336119 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.62
NLRP3-201ENST00000336119 SMC3Q9UQE7 1217 aa11.21□□□□□ -0.62
NLRP3-201ENST00000336119 MAP3K5Q99683 1374 aa11.21□□□□□ -0.62
NLRP3-201ENST00000336119 ZNF335Q9H4Z2 1342 aaPredicted RBP11.21□□□□□ -0.62
NLRP3-201ENST00000336119 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
NLRP3-201ENST00000336119 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
NLRP3-201ENST00000336119 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
NLRP3-201ENST00000336119 IP6K1Q92551 441 aa11.2□□□□□ -0.62
NLRP3-201ENST00000336119 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 PDE1AP54750 535 aa11.2□□□□□ -0.62
NLRP3-201ENST00000336119 DNTTIP2Q5QJE6 756 aaKnown RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 TNPO1Q92973 898 aaKnown RBP11.2□□□□□ -0.62
NLRP3-201ENST00000336119 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
NLRP3-201ENST00000336119 G2E3Q7L622 706 aa11.19□□□□□ -0.62
NLRP3-201ENST00000336119 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
NLRP3-201ENST00000336119 GLRX3O76003 335 aaKnown RBP11.19□□□□□ -0.62
NLRP3-201ENST00000336119 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
NLRP3-201ENST00000336119 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
NLRP3-201ENST00000336119 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
NLRP3-201ENST00000336119 USP6P35125 1406 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 MBD3O95983 291 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 PPP1R42Q7Z4L9 355 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 FSD1Q9BTV5 496 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 CLTCQ00610 1675 aaKnown RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 MYO3AQ8NEV4 1616 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 CABP4P57796 275 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 LRRFIP1Q32MZ4 808 aaKnown RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 PSMA5P28066 241 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
NLRP3-201ENST00000336119 IQSEC2Q5JU85 1478 aa11.18□□□□□ -0.62
NLRP3-201ENST00000336119 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
NLRP3-201ENST00000336119 MYL6BP14649 208 aa11.17□□□□□ -0.62
NLRP3-201ENST00000336119 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
NLRP3-201ENST00000336119 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
NLRP3-201ENST00000336119 AACSQ86V21 672 aa11.17□□□□□ -0.62
NLRP3-201ENST00000336119 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
NLRP3-201ENST00000336119 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
NLRP3-201ENST00000336119 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 GLIPR1L2Q4G1C9 344 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 CHPF2Q9P2E5 772 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 GCP02774 474 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 SSFA2P28290 1259 aa11.16□□□□□ -0.62
NLRP3-201ENST00000336119 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
NLRP3-201ENST00000336119 CWC27Q6UX04 472 aaKnown RBP11.16□□□□□ -0.62
NLRP3-201ENST00000336119 MYOM1P52179 1685 aa11.15□□□□□ -0.62
NLRP3-201ENST00000336119 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
NLRP3-201ENST00000336119 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
NLRP3-201ENST00000336119 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
NLRP3-201ENST00000336119 SIL1Q9H173 461 aa11.15□□□□□ -0.62
NLRP3-201ENST00000336119 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
NLRP3-201ENST00000336119 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.63
NLRP3-201ENST00000336119 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.63
NLRP3-201ENST00000336119 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.63
NLRP3-201ENST00000336119 CYP46A1Q9Y6A2 500 aa11.15□□□□□ -0.63
NLRP3-201ENST00000336119 ANXA1P04083 346 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 TSHZ3Q63HK5 1081 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 FAM184AQ8NB25 1140 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
NLRP3-201ENST00000336119 VPS37CA5D8V6 355 aaPredicted RBP11.14□□□□□ -0.63
NLRP3-201ENST00000336119 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms