RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 TSHZ3Q63HK5 1081 aa14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 HOXC9P31274 260 aa14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 LRRFIP2Q9Y608 721 aaKnown RBP14.29□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 MCM2P49736 904 aa14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 ATP8B2P98198 1209 aa14.27□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 KDRP35968 1356 aa14.27□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
CSPG4P4Y-201ENST00000333235 MAP3K5Q99683 1374 aa14.27□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 NOL8Q76FK4 1167 aaKnown RBP14.27□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 OS9Q13438 667 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 SURF6O75683 361 aaKnown RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 TEFQ10587 303 aa14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PNMA6EA0A0J9YXQ4 647 aa14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 KCNA6P17658 529 aa14.26□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 IL1RAPL2Q9NP60 686 aa14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 ZGPATQ8N5A5 531 aaKnown RBP14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 IL17REQ8NFR9 667 aa14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 ESYT1Q9BSJ8 1104 aa14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 UBR1Q8IWV7 1749 aa14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 BABAM1Q9NWV8 329 aa14.25□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PSME1Q06323 249 aa14.24□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 ESPNB1AK53 854 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 LMOD2Q6P5Q4 547 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 CLEC17AQ6ZS10 378 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PHF8Q9UPP1 1060 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 TMX3Q96JJ7 454 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PKP1Q13835 747 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 CHMLP26374 656 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 CLCN1P35523 988 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 CCDC173Q0VFZ6 552 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 NUTM1Q86Y26 1132 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 USP44Q9H0E7 712 aa14.22□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 ANAPC15P60006 121 aa14.21□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PPP1R42Q7Z4L9 355 aa14.21□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PHAXQ9H814 394 aaKnown RBP14.21□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 IBTKQ9P2D0 1353 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P4Y-201ENST00000333235 PEAK1Q9H792 1746 aa14.21□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 CEP170BQ9Y4F5 1589 aaPredicted RBP14.2□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 C1orf141Q5JVX7 400 aa14.2□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 KIF1BPQ96EK5 621 aa14.2□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 UPF3BQ9BZI7 483 aaKnown RBP14.2□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 HDAC5Q9UQL6 1122 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 CNTROBQ8N137 903 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 DNAAF4Q8WXU2 420 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 C9orf78Q9NZ63 289 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 MAP4K4O95819 1239 aaPredicted RBP14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 PI4KAP2A4QPH2 592 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 MSNP26038 577 aaKnown RBP14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 ZSCAN23Q3MJ62 389 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 PI4KAP1Q8N8J0 262 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 KCNH5Q8NCM2 988 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 IP6K1Q92551 441 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 STAP2Q9UGK3 403 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 MBD3O95983 291 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 CHPF2Q9P2E5 772 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 RBM33Q96EV2 1170 aaKnown RBP14.18□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 CYP2E1P05181 493 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 TOPAZ1Q8N9V7 1692 aa14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 FOXD4L6Q3SYB3 417 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 FOXD4L3Q6VB84 417 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 SYAP1Q96A49 352 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 AOX1Q06278 1338 aa14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 CLASRPQ8N2M8 674 aaKnown RBP14.17□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 ANKLE2Q86XL3 938 aa14.16□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 DIAPH3Q9NSV4 1193 aa14.16□□□□□ -0.14
CSPG4P4Y-201ENST00000333235 PALD1Q9ULE6 856 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms