RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 SLC27A3Q5K4L6 730 aa27.06■■□□□ 1.92
MRPL40-201ENST00000333130 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
MRPL40-201ENST00000333130 LGR6Q9HBX8 967 aa27.05■■□□□ 1.92
MRPL40-201ENST00000333130 NBPF14Q5TI25 921 aa27.04■■□□□ 1.92
MRPL40-201ENST00000333130 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
MRPL40-201ENST00000333130 NFATC2IPQ8NCF5 419 aa27.04■■□□□ 1.92
MRPL40-201ENST00000333130 SIPA1L3O60292 1781 aaPredicted RBP27.02■■□□□ 1.92
MRPL40-201ENST00000333130 LMOD3Q0VAK6 560 aa27.02■■□□□ 1.92
MRPL40-201ENST00000333130 CCNL1Q9UK58 526 aaPredicted RBP27.01■■□□□ 1.91
MRPL40-201ENST00000333130 CEMIPQ8WUJ3 1361 aa27.01■■□□□ 1.91
MRPL40-201ENST00000333130 FAM9BQ8IZU0 186 aa27■■□□□ 1.91
MRPL40-201ENST00000333130 ASAP1Q9ULH1 1129 aa27■■□□□ 1.91
MRPL40-201ENST00000333130 IL17REQ8NFR9 667 aa26.99■■□□□ 1.91
MRPL40-201ENST00000333130 PAPPAQ13219 1627 aa26.99■■□□□ 1.91
MRPL40-201ENST00000333130 C5P01031 1676 aa26.99■■□□□ 1.91
MRPL40-201ENST00000333130 TMPOP42166 694 aaKnown RBP26.98■■□□□ 1.91
MRPL40-201ENST00000333130 RIPK4P57078 832 aa26.98■■□□□ 1.91
MRPL40-201ENST00000333130 PROM2Q8N271 834 aa26.98■■□□□ 1.91
MRPL40-201ENST00000333130 ATG3Q9NT62 314 aa26.98■■□□□ 1.91
MRPL40-201ENST00000333130 TAF1LQ8IZX4 1826 aa26.98■■□□□ 1.91
MRPL40-201ENST00000333130 MCM10Q7L590 875 aa26.97■■□□□ 1.91
MRPL40-201ENST00000333130 ZNF831Q5JPB2 1677 aa26.97■■□□□ 1.91
MRPL40-201ENST00000333130 TTC5Q8N0Z6 440 aa26.96■■□□□ 1.91
MRPL40-201ENST00000333130 LOC102724428A0A0B4J2F2 783 aa26.95■■□□□ 1.9
MRPL40-201ENST00000333130 SIK1P57059 783 aa26.95■■□□□ 1.9
MRPL40-201ENST00000333130 STK32BQ9NY57 414 aa26.95■■□□□ 1.9
MRPL40-201ENST00000333130 NEUROD2Q15784 382 aa26.94■■□□□ 1.9
MRPL40-201ENST00000333130 RBM42Q9BTD8 480 aaKnown RBP26.94■■□□□ 1.9
MRPL40-201ENST00000333130 UBR2Q8IWV8 1755 aa26.93■■□□□ 1.9
MRPL40-201ENST00000333130 DCTN1Q14203 1278 aa26.93■■□□□ 1.9
MRPL40-201ENST00000333130 LRRC4BQ9NT99 713 aa26.93■■□□□ 1.9
MRPL40-201ENST00000333130 APAF1O14727 1248 aa26.92■■□□□ 1.9
MRPL40-201ENST00000333130 RRP7AQ9Y3A4 280 aaKnown RBP26.92■■□□□ 1.9
MRPL40-201ENST00000333130 BTBD11A6QL63 1104 aa26.91■■□□□ 1.9
MRPL40-201ENST00000333130 ATP6V1AP38606 617 aa26.91■■□□□ 1.9
MRPL40-201ENST00000333130 PTCD1O75127 700 aaKnown RBP26.9■■□□□ 1.9
MRPL40-201ENST00000333130 CICQ96RK0 1608 aaPredicted RBP26.88■■□□□ 1.89
MRPL40-201ENST00000333130 KCNQ4P56696 695 aa26.88■■□□□ 1.89
MRPL40-201ENST00000333130 SLC39A6Q13433 755 aa26.88■■□□□ 1.89
MRPL40-201ENST00000333130 R3HDM1Q15032 1099 aaKnown RBP26.88■■□□□ 1.89
MRPL40-201ENST00000333130 TAF7Q15545 349 aaPredicted RBP26.88■■□□□ 1.89
MRPL40-201ENST00000333130 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
MRPL40-201ENST00000333130 ZNF790Q6PG37 636 aa26.88■■□□□ 1.89
MRPL40-201ENST00000333130 C4BP0C0L5 1744 aa26.88■■□□□ 1.89
MRPL40-201ENST00000333130 QSER1Q2KHR3 1735 aa26.87■■□□□ 1.89
MRPL40-201ENST00000333130 SLC15A2Q16348 729 aa26.87■■□□□ 1.89
MRPL40-201ENST00000333130 ANO8Q9HCE9 1232 aaPredicted RBP26.87■■□□□ 1.89
MRPL40-201ENST00000333130 COL5A3P25940 1745 aaPredicted RBP26.87■■□□□ 1.89
MRPL40-201ENST00000333130 TRIM35Q9UPQ4 493 aa26.86■■□□□ 1.89
MRPL40-201ENST00000333130 KCPQ6ZWJ8 1503 aa26.86■■□□□ 1.89
MRPL40-201ENST00000333130 KDM3BQ7LBC6 1761 aa26.85■■□□□ 1.89
MRPL40-201ENST00000333130 TJP1Q07157 1748 aa26.85■■□□□ 1.89
MRPL40-201ENST00000333130 PSDA5PKW4 1024 aaPredicted RBP26.84■■□□□ 1.89
MRPL40-201ENST00000333130 CALD1Q05682 793 aaKnown RBP26.84■■□□□ 1.89
MRPL40-201ENST00000333130 AK7Q96M32 723 aa26.84■■□□□ 1.89
MRPL40-201ENST00000333130 VSIG10Q8N0Z9 540 aa26.84■■□□□ 1.89
MRPL40-201ENST00000333130 FMNL2Q96PY5 1086 aa26.84■■□□□ 1.89
MRPL40-201ENST00000333130 THUMPD2Q9BTF0 503 aaKnown RBP26.84■■□□□ 1.89
MRPL40-201ENST00000333130 TFCP2L1Q9NZI6 479 aa26.84■■□□□ 1.89
MRPL40-201ENST00000333130 TUBGCP6Q96RT7 1819 aa26.83■■□□□ 1.89
MRPL40-201ENST00000333130 CCDC27Q2M243 656 aa26.83■■□□□ 1.88
MRPL40-201ENST00000333130 AKT1S1Q96B36 256 aa26.82■■□□□ 1.88
MRPL40-201ENST00000333130 ITPK1Q13572 414 aa26.81■■□□□ 1.88
MRPL40-201ENST00000333130 ZNF827Q17R98 1081 aa26.81■■□□□ 1.88
MRPL40-201ENST00000333130 NGEFQ8N5V2 710 aa26.81■■□□□ 1.88
MRPL40-201ENST00000333130 BABAM1Q9NWV8 329 aa26.81■■□□□ 1.88
MRPL40-201ENST00000333130 LINC00116Q8NCU8 138 aa26.8■■□□□ 1.88
MRPL40-201ENST00000333130 HEG1Q9ULI3 1381 aa26.79■■□□□ 1.88
MRPL40-201ENST00000333130 UBR3Q6ZT12 1888 aa26.79■■□□□ 1.88
MRPL40-201ENST00000333130 ZNF496Q96IT1 587 aaPredicted RBP26.79■■□□□ 1.88
MRPL40-201ENST00000333130 SLC4A9Q96Q91 983 aa26.79■■□□□ 1.88
MRPL40-201ENST00000333130 TEX13AQ9BXU3 409 aaPredicted RBP26.79■■□□□ 1.88
MRPL40-201ENST00000333130 TSPYL4Q9UJ04 414 aa26.79■■□□□ 1.88
MRPL40-201ENST00000333130 FLAD1Q8NFF5 587 aa26.77■■□□□ 1.88
MRPL40-201ENST00000333130 CNTNAP4Q9C0A0 1308 aa26.77■■□□□ 1.88
MRPL40-201ENST00000333130 CASZ1Q86V15 1759 aa26.76■■□□□ 1.87
MRPL40-201ENST00000333130 RC3H1Q5TC82 1133 aaKnown RBP26.76■■□□□ 1.87
MRPL40-201ENST00000333130 STARD3NLO95772 234 aa26.75■■□□□ 1.87
MRPL40-201ENST00000333130 WWC1Q8IX03 1113 aa26.75■■□□□ 1.87
MRPL40-201ENST00000333130 MIS18AQ9NYP9 233 aa26.75■■□□□ 1.87
MRPL40-201ENST00000333130 MYH14Q7Z406 1995 aaKnown RBP26.75■■□□□ 1.87
MRPL40-201ENST00000333130 SENP3-EIF4A1A0A087X0R7 540 aa26.74■■□□□ 1.87
MRPL40-201ENST00000333130 GNPATO15228 680 aa26.74■■□□□ 1.87
MRPL40-201ENST00000333130 DNAJC10Q8IXB1 793 aa26.74■■□□□ 1.87
MRPL40-201ENST00000333130 LAS1LQ9Y4W2 734 aaKnown RBP26.74■■□□□ 1.87
MRPL40-201ENST00000333130 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
MRPL40-201ENST00000333130 KCNQ3O43525 872 aa26.73■■□□□ 1.87
MRPL40-201ENST00000333130 SNRPA1P09661 255 aaKnown RBP26.73■■□□□ 1.87
MRPL40-201ENST00000333130 SSFA2P28290 1259 aa26.72■■□□□ 1.87
MRPL40-201ENST00000333130 CRKLP46109 303 aaKnown RBP26.72■■□□□ 1.87
MRPL40-201ENST00000333130 RTCBQ9Y3I0 505 aaKnown RBP26.72■■□□□ 1.87
MRPL40-201ENST00000333130 ZNF521Q96K83 1311 aa26.72■■□□□ 1.87
MRPL40-201ENST00000333130 PNPLA7Q6ZV29 1317 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 MSH5O43196 834 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 GNAI1P63096 354 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 CFAP44Q96MT7 982 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 CCDC87Q9NVE4 849 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 IFT57Q9NWB7 429 aa26.71■■□□□ 1.87
MRPL40-201ENST00000333130 CYP19A1P11511 503 aaPredicted RBP26.7■■□□□ 1.86
MRPL40-201ENST00000333130 CHL1O00533 1208 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms