RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
VSTM4-202ENST00000332853 PI4KAP2A4QPH2 592 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
VSTM4-202ENST00000332853 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 PI4KAP1Q8N8J0 262 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 BRMS1Q9HCU9 246 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 ATP5J2-PTCD1G3V325 749 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 MEIS3Q99687 375 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 RLBP1P12271 317 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
VSTM4-202ENST00000332853 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
VSTM4-202ENST00000332853 GNL3LQ9NVN8 582 aaKnown RBP15.48■□□□□ 0.07
VSTM4-202ENST00000332853 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
VSTM4-202ENST00000332853 XBP1P17861 261 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 DDX11Q96FC9 970 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
VSTM4-202ENST00000332853 STK38Q15208 465 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 CCDC83Q8IWF9 413 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
VSTM4-202ENST00000332853 SPC24Q8NBT2 197 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 TCEAL9Q9UHQ7 104 aa15.47■□□□□ 0.07
VSTM4-202ENST00000332853 TRIM5Q9C035 493 aa15.46■□□□□ 0.07
VSTM4-202ENST00000332853 HYPKQ9NX55 129 aa15.46■□□□□ 0.07
VSTM4-202ENST00000332853 CCDC47Q96A33 483 aaKnown RBP15.46■□□□□ 0.07
VSTM4-202ENST00000332853 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
VSTM4-202ENST00000332853 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
VSTM4-202ENST00000332853 MTHFSDQ2M296 383 aaKnown RBP15.46■□□□□ 0.07
VSTM4-202ENST00000332853 OLFM4Q6UX06 510 aa15.46■□□□□ 0.07
VSTM4-202ENST00000332853 FAM13BQ9NYF5 915 aa15.46■□□□□ 0.07
VSTM4-202ENST00000332853 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 CCDC39Q9UFE4 941 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 A0A087WZG4 1122 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
VSTM4-202ENST00000332853 YTHDC2Q9H6S0 1430 aaKnown RBP15.45■□□□□ 0.06
VSTM4-202ENST00000332853 CCDC69A6NI79 296 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
VSTM4-202ENST00000332853 PDILTQ8N807 584 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 ANKRD20A12PQ8NF67 263 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 GRPEL1Q9HAV7 217 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
VSTM4-202ENST00000332853 GPTP24298 496 aa15.45■□□□□ 0.06
VSTM4-202ENST00000332853 PIP4K2AP48426 406 aaPredicted RBP15.45■□□□□ 0.06
VSTM4-202ENST00000332853 IKQ13123 557 aaPredicted RBP15.44■□□□□ 0.06
VSTM4-202ENST00000332853 ZMYM3Q14202 1370 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 ME1P48163 572 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 NUCB1Q02818 461 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 NAT10Q9H0A0 1025 aaKnown RBP15.44■□□□□ 0.06
VSTM4-202ENST00000332853 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 RAI14Q9P0K7 980 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 TDO2P48775 406 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 FERMT3Q86UX7 667 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 NACAP1Q9BZK3 213 aa15.44■□□□□ 0.06
VSTM4-202ENST00000332853 LRP2BPQ9P2M1 347 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
VSTM4-202ENST00000332853 NPATQ14207 1427 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 SMC2O95347 1197 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 KRT85P78386 507 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 ZSCAN25Q6NSZ9 544 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
VSTM4-202ENST00000332853 SSFA2P28290 1259 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 CABLES1Q8TDN4 633 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 PIK3R4Q99570 1358 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 IFIT1P09914 478 aaKnown RBP15.43■□□□□ 0.06
VSTM4-202ENST00000332853 IFNL2Q8IZJ0 200 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 ABCF2Q9UG63 623 aa15.43■□□□□ 0.06
VSTM4-202ENST00000332853 TTC22Q5TAA0 569 aa15.42■□□□□ 0.06
VSTM4-202ENST00000332853 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
VSTM4-202ENST00000332853 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 IGHMBP2P38935 993 aaKnown RBP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 HDAC1Q13547 482 aaPredicted RBP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 BMP2KLQ5H9B9 411 aa15.42■□□□□ 0.06
VSTM4-202ENST00000332853 SPATA32Q96LK8 384 aa15.42■□□□□ 0.06
VSTM4-202ENST00000332853 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
VSTM4-202ENST00000332853 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
VSTM4-202ENST00000332853 UBE3BQ7Z3V4 1068 aa15.41■□□□□ 0.06
VSTM4-202ENST00000332853 AIDAQ96BJ3 306 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
VSTM4-202ENST00000332853 CCDC173Q0VFZ6 552 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 MYO5CQ9NQX4 1742 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 SYCE3A1L190 88 aa15.4■□□□□ 0.06
VSTM4-202ENST00000332853 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
VSTM4-202ENST00000332853 VAMP4O75379 141 aa15.39■□□□□ 0.05
VSTM4-202ENST00000332853 IFIT5Q13325 482 aaKnown RBP15.39■□□□□ 0.05
VSTM4-202ENST00000332853 KRT32Q14532 448 aa15.39■□□□□ 0.05
VSTM4-202ENST00000332853 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms